RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 CARMIL3Q8ND23 1372 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 USP17L12C9JPN9 530 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 USP17L21D6R901 530 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 FOSP01100 380 aaPredicted RBP23.12■■□□□ 1.29
SH3D19-211ENST00000604030 PDE6BP35913 854 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 SYMPKQ92797 1274 aaKnown RBP23.12■■□□□ 1.29
SH3D19-211ENST00000604030 FAM81BQ96LP2 452 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 CLIC4Q9Y696 253 aa23.12■■□□□ 1.29
SH3D19-211ENST00000604030 ABCC12Q96J65 1359 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 hCG_1984214I3L0E3 225 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 ADCY8P40145 1251 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 CCDC170Q8IYT3 715 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 ZNF713Q8N859 430 aaPredicted RBP23.11■■□□□ 1.29
SH3D19-211ENST00000604030 PNMA1Q8ND90 353 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 BPIFB4P59827 614 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 SEPT14Q6ZU15 432 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 TFCP2L1Q9NZI6 479 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.11■■□□□ 1.29
SH3D19-211ENST00000604030 FMNL1O95466 1100 aaPredicted RBP23.11■■□□□ 1.29
SH3D19-211ENST00000604030 EIF6P56537 245 aaKnown RBP23.11■■□□□ 1.29
SH3D19-211ENST00000604030 SEMA3EO15041 775 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 PDE6CP51160 858 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 C10orf76Q5T2E6 689 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 NSUN7Q8NE18 718 aaKnown RBP23.11■■□□□ 1.29
SH3D19-211ENST00000604030 NDUFB9Q9Y6M9 179 aa23.11■■□□□ 1.29
SH3D19-211ENST00000604030 TAF12Q16514 161 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 KRT26Q7Z3Y9 468 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 TRIM11Q96F44 468 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 TUBGCP2Q9BSJ2 902 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 RIPOR2Q9Y4F9 1068 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 SLC12A2P55011 1212 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 MAPKAPK5Q8IW41 473 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 C1orf112Q9NSG2 853 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 BIN2Q9UBW5 565 aaPredicted RBP23.1■■□□□ 1.29
SH3D19-211ENST00000604030 NOP56O00567 594 aaKnown RBP23.1■■□□□ 1.29
SH3D19-211ENST00000604030 THAP12O43422 761 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 DNAJC10Q8IXB1 793 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 CCDC197Q8NCU1 140 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 PFDN4Q9NQP4 134 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 ATF2P15336 505 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 CASP14P31944 242 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 POLR2FP61218 127 aaKnown RBP23.1■■□□□ 1.29
SH3D19-211ENST00000604030 MIER3Q7Z3K6 550 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 TGFBRAP1Q8WUH2 860 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 EPSTI1Q96J88 318 aa23.1■■□□□ 1.29
SH3D19-211ENST00000604030 POLR2BP30876 1174 aaKnown RBP23.09■■□□□ 1.29
SH3D19-211ENST00000604030 PTGDRQ13258 359 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 SLC35F6Q8N357 371 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 IL17REQ8NFR9 667 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.09■■□□□ 1.29
SH3D19-211ENST00000604030 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 CNOT10Q9H9A5 744 aaKnown RBP23.09■■□□□ 1.29
SH3D19-211ENST00000604030 ABCA5Q8WWZ7 1642 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 A0A087WUV0 522 aaPredicted RBP23.09■■□□□ 1.29
SH3D19-211ENST00000604030 KIF11P52732 1056 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 MICAL1Q8TDZ2 1067 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 CNOT6LQ96LI5 555 aaKnown RBP23.09■■□□□ 1.29
SH3D19-211ENST00000604030 GDAP1L1Q96MZ0 367 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 ADAM9Q13443 819 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 SPTLC3Q9NUV7 552 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.09■■□□□ 1.293e-7■■□□□ 14.4
SH3D19-211ENST00000604030 EDC3Q96F86 508 aaKnown RBP23.09■■□□□ 1.29
SH3D19-211ENST00000604030 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
SH3D19-211ENST00000604030 TNNI1P19237 187 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 TECP42680 631 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 RPS8P62241 208 aaKnown RBP23.08■■□□□ 1.29
SH3D19-211ENST00000604030 PANX2Q96RD6 677 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 ATP10DQ9P241 1426 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 MYCLP12524 364 aaPredicted RBP23.08■■□□□ 1.29
SH3D19-211ENST00000604030 PDZD4Q76G19 769 aaPredicted RBP23.08■■□□□ 1.29
SH3D19-211ENST00000604030 TPH2Q8IWU9 490 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 TRIM42Q8IWZ5 723 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 JRKLQ9Y4A0 524 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 ATP7BP35670 1465 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 GOLGA8QA0A0J9YX86 632 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 GOLGA8OA6NCC3 632 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 GOLGA8NF8WBI6 632 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 PRPF6O94906 941 aaKnown RBP23.08■■□□□ 1.29
SH3D19-211ENST00000604030 SLFN14P0C7P3 912 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 FAM47AQ5JRC9 791 aa23.08■■□□□ 1.29
SH3D19-211ENST00000604030 CCNL1Q9UK58 526 aaPredicted RBP23.08■■□□□ 1.29
SH3D19-211ENST00000604030 CFBP00751 764 aa23.08■■□□□ 1.28
SH3D19-211ENST00000604030 IL9RQ01113 521 aa23.08■■□□□ 1.28
SH3D19-211ENST00000604030 ALS2CLQ60I27 953 aa23.08■■□□□ 1.28
SH3D19-211ENST00000604030 CASC4Q6P4E1 433 aa23.08■■□□□ 1.28
SH3D19-211ENST00000604030 BTG4Q9NY30 223 aa23.08■■□□□ 1.28
SH3D19-211ENST00000604030 MRPL11Q9Y3B7 192 aaKnown RBP23.08■■□□□ 1.28
SH3D19-211ENST00000604030 TXNDC9O14530 226 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 SH3BP5O60239 455 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 ATP1A2P50993 1020 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 GUCY2DQ02846 1103 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 LINC00301Q8NCQ3 95 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 ABCB4P21439 1286 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 ZNF827Q17R98 1081 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 EXOC3L4Q17RC7 722 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 RASEFQ8IZ41 740 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 MGARPQ8TDB4 240 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 CACTINQ8WUQ7 758 aaKnown RBP23.07■■□□□ 1.28
SH3D19-211ENST00000604030 STK38LQ9Y2H1 464 aa23.07■■□□□ 1.28
SH3D19-211ENST00000604030 RABGAP1Q9Y3P9 1069 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms