RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 WNT7AO00755 349 aa19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 STAT2P52630 851 aa19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 HMGCS2P54868 508 aa19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 TTLL12Q14166 644 aaPredicted RBP19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 SAFBQ15424 915 aaKnown RBP eCLIP19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 SYAP1Q96A49 352 aaPredicted RBP19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 FOXP1Q9H334 677 aaPredicted RBP19.91■□□□□ 0.78
PPFIA3-207ENST00000602716 BACE1P56817 501 aa19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 KIFC2Q96AC6 838 aa19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 SH3GLB2Q9NR46 395 aa19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 AFG3L2Q9Y4W6 797 aa19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 CLIC4Q9Y696 253 aa19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 NF2P35240 595 aa19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 IREB2P48200 963 aaKnown RBP19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 LEO1Q8WVC0 666 aaPredicted RBP19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 UBE2Q2Q8WVN8 375 aa19.9■□□□□ 0.78
PPFIA3-207ENST00000602716 M0R2N6 131 aa19.89■□□□□ 0.77
PPFIA3-207ENST00000602716 TOB1P50616 345 aaPredicted RBP19.89■□□□□ 0.77
PPFIA3-207ENST00000602716 LDHDQ86WU2 507 aa19.89■□□□□ 0.77
PPFIA3-207ENST00000602716 AS3MTQ9HBK9 375 aa19.89■□□□□ 0.77
PPFIA3-207ENST00000602716 PCDHA4Q9UN74 947 aa19.89■□□□□ 0.77
PPFIA3-207ENST00000602716 CSADQ9Y600 493 aa19.89■□□□□ 0.77
PPFIA3-207ENST00000602716 WDR46O15213 610 aaKnown RBP19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 BLIDQ8IZY5 108 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 CCDC148Q8NFR7 591 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 LPAR1Q92633 364 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 ZMYND12Q9H0C1 365 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 RPAP3Q9H6T3 665 aaPredicted RBP19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 MAP3K11Q16584 847 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 OTUD5Q96G74 571 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 TANGO6Q9C0B7 1094 aa19.88■□□□□ 0.77
PPFIA3-207ENST00000602716 SMCO2A6NFE2 343 aa19.87■□□□□ 0.77
PPFIA3-207ENST00000602716 MSNP26038 577 aaKnown RBP19.87■□□□□ 0.77
PPFIA3-207ENST00000602716 USH1GQ495M9 461 aa19.87■□□□□ 0.77
PPFIA3-207ENST00000602716 DAGLBQ8NCG7 672 aa19.87■□□□□ 0.77
PPFIA3-207ENST00000602716 SPATA32Q96LK8 384 aa19.87■□□□□ 0.77
PPFIA3-207ENST00000602716 TSPY26PQ9H489 355 aa19.87■□□□□ 0.77
PPFIA3-207ENST00000602716 NOL7Q9UMY1 257 aaKnown RBP19.87■□□□□ 0.77
PPFIA3-207ENST00000602716 CCDC174Q6PII3 467 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 PIK3AP1Q6ZUJ8 805 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 ANKRD13AQ8IZ07 590 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 WNK4Q96J92 1243 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 TMEM260Q9NX78 707 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 PCDHA6Q9UN73 950 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 PCDHA8Q9Y5H6 950 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 ATP2B1P20020 1258 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 CALML3P27482 149 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 USP14P54578 494 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 UBE2SQ16763 222 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 PGBD1Q96JS3 809 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 C12orf42Q96LP6 360 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 ZNF396Q96N95 335 aaPredicted RBP19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 RANBP17Q9H2T7 1088 aaKnown RBP19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 FEM1BQ9UK73 627 aa19.86■□□□□ 0.77
PPFIA3-207ENST00000602716 hCG_1984214I3L0E3 225 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 IRF6O14896 467 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 GJA5P36382 358 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 ZNF713Q8N859 430 aaPredicted RBP19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 BRMS1Q9HCU9 246 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 RTEL1Q9NZ71 1219 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 PCDHB6Q9Y5E3 794 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 PCDHA1Q9Y5I3 950 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 ESYT2A0FGR8 921 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 SPDYE5A6NIY4 337 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 SF3A1Q15459 793 aaKnown RBP19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 LDLRAD1Q5T700 205 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 ANO1Q5XXA6 986 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 FAM160B2Q86V87 743 aa19.85■□□□□ 0.77
PPFIA3-207ENST00000602716 OPLAHO14841 1288 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 PLA2G6O60733 806 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 FLOT1O75955 427 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 ARMC9Q7Z3E5 817 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 FBXO11Q86XK2 927 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 LINC00301Q8NCQ3 95 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 CHURC1Q8WUH1 139 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 SLF1Q9BQI6 1058 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 SCAND2PQ9GZW5 306 aaPredicted RBP19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 POLR3EQ9NVU0 708 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 MRVI1Q9Y6F6 885 aa19.84■□□□□ 0.77
PPFIA3-207ENST00000602716 PTPRFP10586 1907 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 ADCY7P51828 1080 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 PTPAQ15257 358 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 TREML2Q5T2D2 321 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 PPP1R18Q6NYC8 613 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 RNF214Q8ND24 703 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 CCDC12Q8WUD4 166 aaPredicted RBP19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 AMNQ9BXJ7 453 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 C6orf50Q9HD87 102 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 BIN2Q9UBW5 565 aaPredicted RBP19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 RCOR1Q9UKL0 485 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 CFAP45Q9UL16 551 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 ZNF536O15090 1300 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 ELP1O95163 1332 aa19.83■□□□□ 0.77
PPFIA3-207ENST00000602716 OFD1O75665 1012 aa19.83■□□□□ 0.76
PPFIA3-207ENST00000602716 JAKMIP3Q5VZ66 844 aa19.83■□□□□ 0.76
PPFIA3-207ENST00000602716 ERO1BQ86YB8 467 aa19.83■□□□□ 0.76
PPFIA3-207ENST00000602716 OPTNQ96CV9 577 aa19.83■□□□□ 0.76
PPFIA3-207ENST00000602716 ATG4CQ96DT6 458 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms