RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 UPK3BL1B0FP48 263 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 CHURC1-FNTBB4DL54 471 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 UPK3BL2E5RIL1 263 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 GNL2Q13823 731 aaKnown RBP4.6□□□□□ -1.67
SGMS1-207ENST00000602619 RTP5Q14D33 572 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 GK5Q6ZS86 529 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 LSRQ86X29 649 aaPredicted RBP4.6□□□□□ -1.67
SGMS1-207ENST00000602619 LINC01356Q8N9X3 169 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 DTWD2Q8NBA8 298 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 OR6P1Q8NGX9 317 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 SYTL4Q96C24 671 aaPredicted RBP4.6□□□□□ -1.67
SGMS1-207ENST00000602619 PPT2Q9UMR5 302 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 ZNF281Q9Y2X9 895 aa4.6□□□□□ -1.67
SGMS1-207ENST00000602619 LRRN2O75325 713 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 UBOX5O94941 541 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 ACRP10323 421 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 CDR1P51861 262 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 TEKQ02763 1124 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 DUSP4Q13115 394 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 RNF141Q8WVD5 230 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 CCDC74BQ96LY2 380 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 G6PC3Q9BUM1 346 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 SRRTQ9BXP5 876 aaKnown RBP4.59□□□□□ -1.67
SGMS1-207ENST00000602619 ANTXR1Q9H6X2 564 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 CAPN10Q9HC96 672 aa4.59□□□□□ -1.67
SGMS1-207ENST00000602619 SDHBP21912 280 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 MCM4P33991 863 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 NASPP49321 788 aaPredicted RBP4.58□□□□□ -1.68
SGMS1-207ENST00000602619 CASP7P55210 303 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 YBX1P67809 324 aaKnown RBP4.58□□□□□ -1.68
SGMS1-207ENST00000602619 NAALADL2Q58DX5 795 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 ARSHQ5FYA8 562 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 MCF2L2Q86YR7 1114 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 MZB1Q8WU39 189 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 FERD3LQ96RJ6 166 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 ASPNQ9BXN1 380 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.58□□□□□ -1.681e-6■■■■□ 21.4
SGMS1-207ENST00000602619 KLHL3Q9UH77 587 aa4.58□□□□□ -1.68
SGMS1-207ENST00000602619 OVOL3O00110 214 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 RAG1P15918 1043 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 GUCY2CP25092 1073 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 EIF6P56537 245 aaKnown RBP4.57□□□□□ -1.68
SGMS1-207ENST00000602619 ZXDAP98168 799 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 ARID5AQ03989 594 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 VPS37DQ86XT2 251 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 IGDCC3Q8IVU1 814 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 ARMC5Q96C12 935 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 PWWP2AQ96N64 755 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 SLC9A7Q96T83 725 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 KCNH3Q9ULD8 1083 aa4.57□□□□□ -1.68
SGMS1-207ENST00000602619 SHISA3A0PJX4 238 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 TNFRSF1AP19438 455 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 ZFYVE27Q5T4F4 411 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 CCDC81Q6ZN84 652 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 FAM169BQ8N8A8 192 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 KREMEN1Q96MU8 473 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 KIF2CQ99661 725 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 CRTAC1Q9NQ79 661 aa4.56□□□□□ -1.68
SGMS1-207ENST00000602619 NRDCO43847 1150 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 USP2O75604 605 aaPredicted RBP4.55□□□□□ -1.68
SGMS1-207ENST00000602619 POLR2BP30876 1174 aaKnown RBP4.55□□□□□ -1.68
SGMS1-207ENST00000602619 RNF4P78317 190 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 LDHDQ86WU2 507 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 TMEM192Q8IY95 271 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 PHACTR4Q8IZ21 702 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 SLC16A11Q8NCK7 471 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 SMARCC1Q92922 1105 aaPredicted RBP4.55□□□□□ -1.68
SGMS1-207ENST00000602619 PRR13Q9NZ81 148 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 SLC12A7Q9Y666 1083 aa4.55□□□□□ -1.68
SGMS1-207ENST00000602619 A0A1W2PQH9 124 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 K7ESM1 405 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 FFAR3O14843 346 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 KCNC1P48547 511 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 PMS1P54277 932 aaKnown RBP4.54□□□□□ -1.68
SGMS1-207ENST00000602619 SLURP1P55000 103 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 ZYXQ15942 572 aaKnown RBP4.54□□□□□ -1.68
SGMS1-207ENST00000602619 TNNI3KQ59H18 835 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 NBPF12Q5TAG4 269 aaPredicted RBP4.54□□□□□ -1.68
SGMS1-207ENST00000602619 UNC5AQ6ZN44 842 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 RUFY4Q6ZNE9 571 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 DHRS1Q96LJ7 313 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.54□□□□□ -1.682e-9■□□□□ 10.8
SGMS1-207ENST00000602619 KLHL14Q9P2G3 628 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 SUCOQ9UBS9 1254 aaKnown RBP4.54□□□□□ -1.68
SGMS1-207ENST00000602619 PRKAG3Q9UGI9 489 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 CNOT11Q9UKZ1 510 aaKnown RBP4.54□□□□□ -1.68
SGMS1-207ENST00000602619 ZNF214Q9UL59 606 aaPredicted RBP4.54□□□□□ -1.68
SGMS1-207ENST00000602619 PALD1Q9ULE6 856 aa4.54□□□□□ -1.68
SGMS1-207ENST00000602619 LTBP3Q9NS15 1303 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 FSHBP01225 129 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 PNLIPP16233 465 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 RPL10P27635 214 aaKnown RBP4.53□□□□□ -1.68
SGMS1-207ENST00000602619 DNAJA1P31689 397 aaKnown RBP4.53□□□□□ -1.68
SGMS1-207ENST00000602619 GBP1P32455 592 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 MAGEA10P43363 369 aaPredicted RBP4.53□□□□□ -1.68
SGMS1-207ENST00000602619 SLC14A2Q15849 920 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 ANKRD39Q53RE8 183 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 FERMT3Q86UX7 667 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 PPFIBP1Q86W92 1011 aa4.53□□□□□ -1.68
SGMS1-207ENST00000602619 USHBP1Q8N6Y0 703 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms