RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 THOC1Q96FV9 657 aaKnown RBP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 ANGPTL2Q9UKU9 493 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 DENND2AQ9ULE3 1009 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 A2MP01023 1474 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 RNMTO43148 476 aaKnown RBP9.52□□□□□ -0.89
CSMD1-216ENST00000602557 CROCCP2Q86T23 111 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 PPP4R1Q8TF05 950 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 HVCN1Q96D96 273 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 ZBTB10Q96DT7 871 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 ABCB6Q9NP58 842 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
CSMD1-216ENST00000602557 GIPC1O14908 333 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 PPP1R12AO14974 1030 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 THAP12O43422 761 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 HDLBPQ00341 1268 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 SNRNP27Q8WVK2 155 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 INTS9Q9NV88 658 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 PAIP2BQ9ULR5 123 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 PHLPP2Q6ZVD8 1323 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 EEF1B2P24534 225 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 NBPF14Q5TI25 921 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 DIS3L2Q8IYB7 885 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 SNX29Q8TEQ0 813 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 RAB17Q9H0T7 212 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 KDM1AO60341 852 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 RBM17Q96I25 401 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 RPGRIP1Q96KN7 1286 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 LSM14BQ9BX40 385 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 SH2D4AQ9H788 454 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 GFAPP14136 432 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 REXO1Q8N1G1 1221 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 TEKT1Q969V4 418 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 NUP58Q9BVL2 599 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 ELF1P32519 619 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 OLFML2BQ68BL8 750 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 SLC1A4P43007 532 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 STAMQ92783 540 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 COBLO75128 1261 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 SLCO1A2P46721 670 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 CASP8Q14790 479 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 GRAMD1BQ3KR37 738 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 MLKLQ8NB16 471 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 SEPT8Q92599 483 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 DBNDD2Q9BQY9 259 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 NR1D1P20393 614 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 DYMQ7RTS9 669 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 GSPT2Q8IYD1 628 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 MYO9BQ13459 2157 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 PPP1R2P41236 205 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 EYA3Q99504 573 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 CDC23Q9UJX2 597 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 MAN1A1P33908 653 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 LONP1P36776 959 aaKnown RBP9.51□□□□□ -0.89
CSMD1-216ENST00000602557 KLHL30Q0D2K2 578 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 NBPF20Q3BBV1 942 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 NBPF3Q9H094 633 aa9.51□□□□□ -0.89
CSMD1-216ENST00000602557 PTPRKQ15262 1439 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 EXOC3O60645 756 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 LRRC8CQ8TDW0 803 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 METTL22Q9BUU2 404 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-216ENST00000602557 EYA2O00167 538 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 ATP8B1O43520 1251 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 TAF5LO75529 589 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 PDCD2Q16342 344 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-216ENST00000602557 NAA35Q5VZE5 725 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 KRT40Q6A162 431 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 HAUS2Q9NVX0 235 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 MYO1AQ9UBC5 1043 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 KCNJ18B7U540 433 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 SGSM2O43147 1006 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 KRT19P08727 400 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 KCNJ12Q14500 433 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 USP28Q96RU2 1077 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 VPS54Q9P1Q0 977 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 EYA1Q99502 592 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 BCAP29Q9UHQ4 241 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 SLC7A5Q01650 507 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 SLC30A9Q6PML9 568 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 IFT122Q9HBG6 1241 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 ZNF518AQ6AHZ1 1483 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 EVI5O60447 810 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 DKC1O60832 514 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 36
CSMD1-216ENST00000602557 DNM3Q9UQ16 869 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 CDC25BP30305 580 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 CTAGE3PQ8IX95 158 aa9.5□□□□□ -0.89
CSMD1-216ENST00000602557 TAB3Q8N5C8 712 aaPredicted RBP9.5□□□□□ -0.89
CSMD1-216ENST00000602557 IL1RL1Q01638 556 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 NACA2Q9H009 215 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 OTUD6AQ7L8S5 288 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 BCRP11274 1271 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 CCDC125Q86Z20 511 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 LRWD1Q9UFC0 647 aa9.49□□□□□ -0.89
CSMD1-216ENST00000602557 SH3TC1Q8TE82 1336 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms