RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 SENP2Q9HC62 589 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
USE1-210ENST00000601662 HTTP42858 3142 aa16.81■□□□□ 0.28
USE1-210ENST00000601662 POTEFA5A3E0 1075 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 GOLGA8BA8MQT2 603 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 TMEM232C9JQI7 657 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 KIF5BP33176 963 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 SLC1A4P43007 532 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 GNAQP50148 359 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 METAP2P50579 478 aaKnown RBP eCLIP16.8■□□□□ 0.28
USE1-210ENST00000601662 TROAPQ12815 778 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 TMEM132BQ14DG7 1078 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 MTFR1Q15390 333 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 CPLX2Q6PUV4 134 aaKnown RBP16.8■□□□□ 0.28
USE1-210ENST00000601662 NCAPG2Q86XI2 1143 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 FANCBQ8NB91 859 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 RBM28Q9NW13 759 aaKnown RBP16.8■□□□□ 0.28
USE1-210ENST00000601662 IVNS1ABPQ9Y6Y0 642 aa16.8■□□□□ 0.28
USE1-210ENST00000601662 VWA5AO00534 786 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 ERCC3P19447 782 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 UBXN2AP68543 259 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 CCDC96Q2M329 555 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 KCTD1Q719H9 257 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 RASGRP2Q7LDG7 609 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 PRPF38AQ8NAV1 312 aaKnown RBP16.79■□□□□ 0.28
USE1-210ENST00000601662 CTCFLQ8NI51 663 aaPredicted RBP16.79■□□□□ 0.28
USE1-210ENST00000601662 NUP133Q8WUM0 1156 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 FEM1BQ9UK73 627 aa16.79■□□□□ 0.28
USE1-210ENST00000601662 RLFQ13129 1914 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 GOLGA8AA7E2F4 631 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 ZBED4O75132 1171 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 INHAP05111 366 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 HSP90AA1P07900 732 aaKnown RBP16.78■□□□□ 0.28
USE1-210ENST00000601662 PTPREP23469 700 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 STAT3P40763 770 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 STK3Q13188 491 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 CUL4AQ13619 759 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 RTN1Q16799 776 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 MORN1Q5T089 497 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 CPXCR1Q8N123 301 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 PXYLP1Q8TE99 480 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 INTS4Q96HW7 963 aaKnown RBP16.78■□□□□ 0.28
USE1-210ENST00000601662 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 LLPHQ9BRT6 129 aaKnown RBP16.78■□□□□ 0.28
USE1-210ENST00000601662 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
USE1-210ENST00000601662 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.78■□□□□ 0.28
USE1-210ENST00000601662 CPLX1O14810 134 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 CDKL5O76039 1030 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 PARP1P09874 1014 aaKnown RBP16.77■□□□□ 0.28
USE1-210ENST00000601662 CCL5P13501 91 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 EN2P19622 333 aaPredicted RBP16.77■□□□□ 0.28
USE1-210ENST00000601662 RGS2P41220 211 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 CCT2P78371 535 aaKnown RBP16.77■□□□□ 0.28
USE1-210ENST00000601662 ASPRV1Q53RT3 343 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 GPATCH4Q5T3I0 446 aaKnown RBP16.77■□□□□ 0.28
USE1-210ENST00000601662 CHURC1Q8WUH1 139 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 DCAF4Q8WV16 495 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 GTF3C6Q969F1 213 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 GMCL1Q96IK5 515 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 IPO9Q96P70 1041 aaKnown RBP16.77■□□□□ 0.28
USE1-210ENST00000601662 RNF208Q9H0X6 261 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 UNC93B1Q9H1C4 597 aa16.77■□□□□ 0.28
USE1-210ENST00000601662 CENPFP49454 3210 aa16.77■□□□□ 0.27
USE1-210ENST00000601662 NID2Q14112 1375 aa16.77■□□□□ 0.27
USE1-210ENST00000601662 SLC15A5A6NIM6 579 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 SNHG28P0DPA3 235 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 SMARCA1P28370 1054 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 SNAP25P60880 206 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 SCRN1Q12765 414 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 TRIM32Q13049 653 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 MAP2K5Q13163 448 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 GRM4Q14833 912 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 CCL14Q16627 93 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 SNRNP48Q6IEG0 339 aaKnown RBP16.76■□□□□ 0.27
USE1-210ENST00000601662 NECAB1Q8N987 351 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 SHCBP1Q8NEM2 672 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 REPS2Q8NFH8 660 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 MYL10Q9BUA6 226 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 MROH8Q9H579 483 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 RAVER2Q9HCJ3 691 aaKnown RBP16.76■□□□□ 0.27
USE1-210ENST00000601662 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
USE1-210ENST00000601662 FRMPD2Q68DX3 1309 aaPredicted RBP16.75■□□□□ 0.27
USE1-210ENST00000601662 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
USE1-210ENST00000601662 LARGE1O95461 756 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 SLC25A27O95847 323 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 HMGCRP04035 888 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 PDHBP11177 359 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 SLC16A2P36021 539 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 RGS19P49795 217 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 STAT2P52630 851 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 MLLT1Q03111 559 aaPredicted RBP16.75■□□□□ 0.27
USE1-210ENST00000601662 TTBK2Q6IQ55 1244 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 DPP9Q86TI2 863 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 RIOX2Q8IUF8 465 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 TRIB2Q92519 343 aa16.75■□□□□ 0.27
USE1-210ENST00000601662 USP6NLQ92738 828 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms