RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.88□□□□□ -0.83
LINC00343-209ENST00000601607 AGMOQ6ZNB7 445 aa9.88□□□□□ -0.83
LINC00343-209ENST00000601607 AMIGO3Q86WK7 504 aa9.88□□□□□ -0.83
LINC00343-209ENST00000601607 ELMO3Q96BJ8 720 aa9.88□□□□□ -0.83
LINC00343-209ENST00000601607 PIM2Q9P1W9 311 aa9.88□□□□□ -0.83
LINC00343-209ENST00000601607 PCOLCE2Q9UKZ9 415 aa9.88□□□□□ -0.83
LINC00343-209ENST00000601607 LEMD3Q9Y2U8 911 aa9.88□□□□□ -0.83
LINC00343-209ENST00000601607 CENPJQ9HC77 1338 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-209ENST00000601607 MED26O95402 600 aa9.87□□□□□ -0.83
LINC00343-209ENST00000601607 RLBP1P12271 317 aa9.87□□□□□ -0.83
LINC00343-209ENST00000601607 LRFN4Q6PJG9 635 aa9.87□□□□□ -0.83
LINC00343-209ENST00000601607 SMIM5Q71RC9 77 aa9.87□□□□□ -0.83
LINC00343-209ENST00000601607 FLAD1Q8NFF5 587 aa9.87□□□□□ -0.83
LINC00343-209ENST00000601607 METTL22Q9BUU2 404 aaPredicted RBP9.87□□□□□ -0.83
LINC00343-209ENST00000601607 RGPD5Q99666 1765 aa9.87□□□□□ -0.83
LINC00343-209ENST00000601607 USP47Q96K76 1375 aa9.87□□□□□ -0.83
LINC00343-209ENST00000601607 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 F6X3S4 739 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 ZNF16P17020 682 aaPredicted RBP9.86□□□□□ -0.83
LINC00343-209ENST00000601607 TXKP42681 527 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 ARHGAP27Q6ZUM4 889 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 ZNF765Q7L2R6 523 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC00343-209ENST00000601607 PLPPR2Q96GM1 343 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 BCL11AQ9H165 835 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 MIR1-1HGQ9H1L0 117 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 TLR6Q9Y2C9 796 aa9.86□□□□□ -0.83
LINC00343-209ENST00000601607 TTC21AQ8NDW8 1320 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 TFE3P19532 575 aaPredicted RBP9.85□□□□□ -0.83
LINC00343-209ENST00000601607 HOXA10P31260 410 aaPredicted RBP9.85□□□□□ -0.83
LINC00343-209ENST00000601607 NTF4P34130 210 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 CYP27A1Q02318 531 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 RING1Q06587 406 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 WIPI1Q5MNZ9 446 aaPredicted RBP9.85□□□□□ -0.83
LINC00343-209ENST00000601607 ZBTB37Q5TC79 503 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 C9orf131Q5VYM1 1079 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 DUSP27Q5VZP5 1158 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 HDXQ7Z353 690 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 PXDNLA1KZ92 1463 aa9.85□□□□□ -0.83
LINC00343-209ENST00000601607 QRICH2Q9H0J4 1663 aa9.84□□□□□ -0.83
LINC00343-209ENST00000601607 PRAMEF27A3QJZ7 478 aa9.84□□□□□ -0.83
LINC00343-209ENST00000601607 FANCGO15287 622 aa9.84□□□□□ -0.83
LINC00343-209ENST00000601607 CDK8P49336 464 aa9.84□□□□□ -0.83
LINC00343-209ENST00000601607 GP2P55259 537 aaKnown RBP9.84□□□□□ -0.83
LINC00343-209ENST00000601607 CPSF6Q16630 551 aaKnown RBP eCLIP9.84□□□□□ -0.83
LINC00343-209ENST00000601607 PHC3Q8NDX5 983 aa9.84□□□□□ -0.83
LINC00343-209ENST00000601607 LY75O60449 1722 aa9.84□□□□□ -0.83
LINC00343-209ENST00000601607 KCPQ6ZWJ8 1503 aa9.83□□□□□ -0.84
LINC00343-209ENST00000601607 FAM87AP0C7U9 286 aa9.83□□□□□ -0.84
LINC00343-209ENST00000601607 MRPL58Q14197 206 aaKnown RBP9.83□□□□□ -0.84
LINC00343-209ENST00000601607 OGFOD3Q6PK18 319 aa9.83□□□□□ -0.84
LINC00343-209ENST00000601607 UBE3DQ7Z6J8 389 aa9.83□□□□□ -0.84
LINC00343-209ENST00000601607 KRTAP19-1Q8IUB9 90 aa9.83□□□□□ -0.84
LINC00343-209ENST00000601607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00343-209ENST00000601607 SMC1BQ8NDV3 1235 aa9.83□□□□□ -0.84
LINC00343-209ENST00000601607 LTV1Q96GA3 475 aaPredicted RBP9.83□□□□□ -0.84
LINC00343-209ENST00000601607 A0A0G2JLW4 131 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 CYP26A1O43174 497 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 FOSL1P15407 271 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 SPINK2P20155 84 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 CDC37L1Q7L3B6 337 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 CYFIP1Q7L576 1253 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 ZCRB1Q8TBF4 217 aaKnown RBP9.82□□□□□ -0.84
LINC00343-209ENST00000601607 JARID2Q92833 1246 aaPredicted RBP9.82□□□□□ -0.84
LINC00343-209ENST00000601607 LRRC4CQ9HCJ2 640 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 SNCAIPQ9Y6H5 919 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 PALLDQ8WX93 1383 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 PLEKHG2Q9H7P9 1386 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 DOT1LQ8TEK3 1739 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
LINC00343-209ENST00000601607 KTN1Q86UP2 1357 aaKnown RBP9.81□□□□□ -0.84
LINC00343-209ENST00000601607 MMP10P09238 476 aa9.81□□□□□ -0.84
LINC00343-209ENST00000601607 NME9Q86XW9 330 aa9.81□□□□□ -0.84
LINC00343-209ENST00000601607 FMNL2Q96PY5 1086 aa9.81□□□□□ -0.84
LINC00343-209ENST00000601607 OAS3Q9Y6K5 1087 aaKnown RBP9.81□□□□□ -0.84
LINC00343-209ENST00000601607 C10orf71Q711Q0 1435 aa9.81□□□□□ -0.84
LINC00343-209ENST00000601607 GBP2P32456 591 aaPredicted RBP9.8□□□□□ -0.84
LINC00343-209ENST00000601607 CYP27C1Q4G0S4 372 aa9.8□□□□□ -0.84
LINC00343-209ENST00000601607 DTX1Q86Y01 620 aa9.8□□□□□ -0.84
LINC00343-209ENST00000601607 RELL1Q8IUW5 271 aa9.8□□□□□ -0.84
LINC00343-209ENST00000601607 MEGF6O75095 1541 aa9.8□□□□□ -0.84
LINC00343-209ENST00000601607 EVC2Q86UK5 1308 aa9.8□□□□□ -0.84
LINC00343-209ENST00000601607 LEFTY1O75610 366 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 DPEP1P16444 411 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 TGFB2P61812 414 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 ETF1P62495 437 aaKnown RBP9.79□□□□□ -0.84
LINC00343-209ENST00000601607 TSNAXIP1Q2TAA8 658 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 TOP6BLQ8N6T0 577 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 ZNF507Q8TCN5 953 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 TMEM74Q96NL1 305 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 RSRP1Q9BUV0 290 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 WNT10AQ9GZT5 417 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 RNF181Q9P0P0 153 aa9.79□□□□□ -0.84
LINC00343-209ENST00000601607 C5P01031 1676 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 USP54Q70EL1 1684 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 GFRA2O00451 464 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 FOXN1O15353 648 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 PF4P02776 101 aa9.78□□□□□ -0.84
LINC00343-209ENST00000601607 CAMK2GQ13555 558 aaPredicted RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms