RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 VWA3BQ502W6 1294 aa16.42■□□□□ 0.22
SYMPK-213ENST00000599460 LAD1O00515 517 aa16.42■□□□□ 0.22
SYMPK-213ENST00000599460 ACTN2P35609 894 aa16.42■□□□□ 0.22
SYMPK-213ENST00000599460 TBC1D10BQ4KMP7 808 aaPredicted RBP16.42■□□□□ 0.22
SYMPK-213ENST00000599460 XKR9Q5GH70 373 aa16.42■□□□□ 0.22
SYMPK-213ENST00000599460 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
SYMPK-213ENST00000599460 CRAMP1Q96RY5 1269 aa16.42■□□□□ 0.22
SYMPK-213ENST00000599460 GH2P01242 217 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 FERMT1Q9BQL6 677 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 PANK4Q9NVE7 773 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 A0A1W2PQ27 194 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 A0A1W2PQ64 194 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 A0A1W2PQD8 194 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 ZNF827Q17R98 1081 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 CCDC122Q5T0U0 273 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 MSANTD4Q8NCY6 345 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 KIFAP3Q92845 792 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 NUP58Q9BVL2 599 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
SYMPK-213ENST00000599460 FTOQ9C0B1 505 aaKnown RBP eCLIP16.41■□□□□ 0.22
SYMPK-213ENST00000599460 BCCIPQ9P287 314 aaKnown RBP eCLIP16.41■□□□□ 0.22
SYMPK-213ENST00000599460 GTPBP6O43824 516 aaPredicted RBP16.41■□□□□ 0.22
SYMPK-213ENST00000599460 CYP4A11Q02928 519 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 CYP26C1Q6V0L0 522 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 ARMC9Q7Z3E5 817 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 MYOCDQ8IZQ8 938 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 TBC1D16Q8TBP0 767 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
SYMPK-213ENST00000599460 SYT10Q6XYQ8 523 aa16.41■□□□□ 0.22
SYMPK-213ENST00000599460 GSG1L2A8MUP6 293 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 NT5C2P49902 561 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 CAPZA3Q96KX2 299 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 TRPC6Q9Y210 931 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 TNFAIP3P21580 790 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 MAP3K9P80192 1104 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 KCTD2Q14681 263 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 ASIC2Q16515 512 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 SLC44A5Q8NCS7 719 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 TSGA10Q9BZW7 698 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 NMT2O60551 498 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 OSBPP22059 807 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 LRCH2Q5VUJ6 765 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 INTS5Q6P9B9 1019 aaKnown RBP16.4■□□□□ 0.22
SYMPK-213ENST00000599460 METTL13Q8N6R0 699 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 RPN1P04843 607 aaKnown RBP16.4■□□□□ 0.22
SYMPK-213ENST00000599460 RDH13Q8NBN7 331 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 DEPTORQ8TB45 409 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 DYDC1Q8WWB3 177 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 KIAA1024Q9UPX6 916 aa16.4■□□□□ 0.22
SYMPK-213ENST00000599460 PNMA6FA0A0J9YX94 578 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 SNAP25P60880 206 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 CCDC50Q8IVM0 306 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
SYMPK-213ENST00000599460 ZNF341Q9BYN7 854 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 PCDHB13Q9Y5F0 798 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 UTYO14607 1347 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 IREB2P48200 963 aaKnown RBP16.39■□□□□ 0.21
SYMPK-213ENST00000599460 ALX1Q15699 326 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 ZNF577Q9BSK1 485 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
SYMPK-213ENST00000599460 UBE2SQ16763 222 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 MB21D2Q8IYB1 491 aaPredicted RBP16.39■□□□□ 0.21
SYMPK-213ENST00000599460 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 USP42Q9H9J4 1324 aaKnown RBP16.39■□□□□ 0.21
SYMPK-213ENST00000599460 TMEM47Q9BQJ4 181 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 IMPACTQ9P2X3 320 aa16.39■□□□□ 0.21
SYMPK-213ENST00000599460 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 USP17L5A8MUK1 530 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 MORC3Q14149 939 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 LINC00301Q8NCQ3 95 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 COL3A1P02461 1466 aaPredicted RBP16.38■□□□□ 0.21
SYMPK-213ENST00000599460 TMTC3Q6ZXV5 915 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 DHX37Q8IY37 1157 aaKnown RBP16.38■□□□□ 0.21
SYMPK-213ENST00000599460 TRIML1Q8N9V2 468 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 SLC39A2Q9NP94 309 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 PSDA5PKW4 1024 aaPredicted RBP16.38■□□□□ 0.21
SYMPK-213ENST00000599460 KIF4AO95239 1232 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 ASNSP08243 561 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 MYZAPP0CAP1 466 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 CLCN1P35523 988 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 CYP2J2P51589 502 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 RESTQ13127 1097 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
SYMPK-213ENST00000599460 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 GPIHBP1Q8IV16 184 aa16.38■□□□□ 0.21
SYMPK-213ENST00000599460 XPO4Q9C0E2 1151 aaKnown RBP16.38■□□□□ 0.21
SYMPK-213ENST00000599460 ENAHQ8N8S7 591 aaPredicted RBP16.37■□□□□ 0.21
SYMPK-213ENST00000599460 RABGAP1Q9Y3P9 1069 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 KCNJ18B7U540 433 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 K7ENM7 598 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 GNA14O95837 355 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 KRT9P35527 623 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 LMAN1P49257 510 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 CCNA1P78396 465 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 KCNJ12Q14500 433 aa16.37■□□□□ 0.21
SYMPK-213ENST00000599460 NSUN4Q96CB9 384 aaKnown RBP16.37■□□□□ 0.21
SYMPK-213ENST00000599460 IWS1Q96ST2 819 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms