RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 KIFC2Q96AC6 838 aa19.68■□□□□ 0.74
SHKBP1-215ENST00000597649 KATNBL1Q9H079 304 aa19.68■□□□□ 0.74
SHKBP1-215ENST00000597649 MKNK2Q9HBH9 465 aa19.68■□□□□ 0.74
SHKBP1-215ENST00000597649 SLC38A10Q9HBR0 1119 aa19.68■□□□□ 0.74
SHKBP1-215ENST00000597649 DDX19BQ9UMR2 479 aa19.68■□□□□ 0.74
SHKBP1-215ENST00000597649 GREB1LQ9C091 1923 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 ARVCFO00192 962 aa19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 TJAP1Q5JTD0 557 aa19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 GNASQ5JWF2 1037 aa19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 ZSCAN25Q6NSZ9 544 aa19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 ZNF365Q70YC5 407 aa19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 MKL1Q969V6 931 aa19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 VTI1AQ96AJ9 217 aa19.67■□□□□ 0.74
SHKBP1-215ENST00000597649 CNTN2Q02246 1040 aa19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 PPIGQ13427 754 aaKnown RBP eCLIP19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 GIMAP6Q6P9H5 292 aa19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 FAM126BQ8IXS8 530 aa19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 ANKRD35Q8N283 1001 aa19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 PCSK9Q8NBP7 692 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 ABHD16BQ9H3Z7 469 aa19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 EPB41L4AQ9HCS5 686 aaPredicted RBP19.66■□□□□ 0.74
SHKBP1-215ENST00000597649 A0A0U1RQG5 324 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 PRDM1O75626 825 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 CD4P01730 458 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 CYP2C18P33260 490 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 NKX3-2P78367 333 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 ADGRE1Q14246 886 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 ARMCX2Q7L311 632 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 CCDC144CPQ8IYA2 1237 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 PPM1EQ8WY54 764 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 CEP95Q96GE4 821 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 PPP1R12CQ9BZL4 782 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 PRDM12Q9H4Q4 367 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 MTMR4Q9NYA4 1195 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 FEM1BQ9UK73 627 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 ASTN1O14525 1302 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 MROH7Q68CQ1 1323 aa19.65■□□□□ 0.74
SHKBP1-215ENST00000597649 PTGS1P23219 599 aa19.64■□□□□ 0.73
SHKBP1-215ENST00000597649 BEX3Q00994 111 aa19.64■□□□□ 0.73
SHKBP1-215ENST00000597649 CCDC129Q6ZRS4 1044 aa19.64■□□□□ 0.73
SHKBP1-215ENST00000597649 CHST13Q8NET6 341 aa19.64■□□□□ 0.73
SHKBP1-215ENST00000597649 SPC25Q9HBM1 224 aa19.64■□□□□ 0.73
SHKBP1-215ENST00000597649 CXXC1Q9P0U4 656 aaPredicted RBP19.64■□□□□ 0.73
SHKBP1-215ENST00000597649 DDX49Q9Y6V7 483 aaKnown RBP19.64■□□□□ 0.73
SHKBP1-215ENST00000597649 MCM3APO60318 1980 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 ZNF444Q8N0Y2 327 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 LRRC47Q8N1G4 583 aaKnown RBP19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 TMEM199Q8N511 208 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 FAM133AQ8N9E0 248 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 KBTBD3Q8NAB2 608 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 SLC43A3Q8NBI5 491 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 LRRCC1Q9C099 1032 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 HOMER2Q9NSB8 354 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 FBXO40Q9UH90 709 aa19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 CTDP1Q9Y5B0 961 aaPredicted RBP19.63■□□□□ 0.73
SHKBP1-215ENST00000597649 GRIN2DO15399 1336 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 UMODL1Q5DID0 1318 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 SOWAHBA6NEL2 793 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 TNFRSF10AO00220 468 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 OAZ1P54368 228 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 TSHZ3Q63HK5 1081 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 HERVK_113Q902F9 699 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 TRANK1O15050 2925 aa19.62■□□□□ 0.73
SHKBP1-215ENST00000597649 M0R2C6 588 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 RNF113AO15541 343 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 GPAA1O43292 621 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 AKNAD1Q5T1N1 836 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 TMEM63BQ5T3F8 832 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 SLFN13Q68D06 897 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 PSRC1Q6PGN9 363 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 CCDC174Q6PII3 467 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 CXCL17Q6UXB2 119 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 GMCL1P1Q8NEA9 526 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 APPBP2Q92624 585 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 CHMP4CQ96CF2 233 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 AGBL1Q96MI9 1066 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 CRBNQ96SW2 442 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 GAS2L1Q99501 681 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 IL23AQ9NPF7 189 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 ECHDC1Q9NTX5 307 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 GNEQ9Y223 722 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 MYH7P12883 1935 aa19.61■□□□□ 0.73
SHKBP1-215ENST00000597649 ZNF536O15090 1300 aa19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 TMEM232C9JQI7 657 aa19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 TTLL1O95922 423 aa19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 BMP3P12645 472 aa19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 TNFAIP2Q03169 654 aa19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 VWCEQ96DN2 955 aa19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 A1CFQ9NQ94 594 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 YBX2Q9Y2T7 364 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-215ENST00000597649 TLR3O15455 904 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 TDO2P48775 406 aa19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 CCDC85BQ15834 202 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 IFNL3Q8IZI9 196 aa19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 NEDD1Q8NHV4 660 aa19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 ATXN2LQ8WWM7 1075 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 ASB2Q96Q27 587 aa19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 NKX2-4Q9H2Z4 354 aa19.59■□□□□ 0.73
SHKBP1-215ENST00000597649 PDGFCQ9NRA1 345 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms