RNA–Protein interactions for RNA: ENST00000597198.5

IRF3-217, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene IRF3, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-217ENST00000597198 SYNE3Q6ZMZ3 975 aa18.89■□□□□ 0.61
IRF3-217ENST00000597198 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.61
IRF3-217ENST00000597198 RBM28Q9NW13 759 aaKnown RBP18.89■□□□□ 0.61
IRF3-217ENST00000597198 ISY1Q9ULR0 285 aaKnown RBP18.89■□□□□ 0.61
IRF3-217ENST00000597198 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
IRF3-217ENST00000597198 CNTNAP5Q8WYK1 1306 aa18.89■□□□□ 0.61
IRF3-217ENST00000597198 LCTP09848 1927 aa18.89■□□□□ 0.61
IRF3-217ENST00000597198 CTGFP29279 349 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 ADD1P35611 737 aaKnown RBP18.88■□□□□ 0.61
IRF3-217ENST00000597198 SNAP25P60880 206 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 IKQ13123 557 aaPredicted RBP18.88■□□□□ 0.61
IRF3-217ENST00000597198 PPP2R5BQ15173 497 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 SAMD1Q6SPF0 538 aaPredicted RBP18.88■□□□□ 0.61
IRF3-217ENST00000597198 PAGR1Q9BTK6 254 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 SPATC1LQ9H0A9 340 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 NCOA5Q9HCD5 579 aaKnown RBP18.88■□□□□ 0.61
IRF3-217ENST00000597198 PFKFB2O60825 505 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 GNAQP50148 359 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 OAZ1P54368 228 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 SCRN1Q12765 414 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 LZTS2Q9BRK4 669 aa18.88■□□□□ 0.61
IRF3-217ENST00000597198 PPP1R11O60927 126 aaPredicted RBP18.87■□□□□ 0.61
IRF3-217ENST00000597198 GPRC5AQ8NFJ5 357 aa18.87■□□□□ 0.61
IRF3-217ENST00000597198 MOV10L1Q9BXT6 1211 aaKnown RBP18.87■□□□□ 0.61
IRF3-217ENST00000597198 PORCNQ9H237 461 aa18.87■□□□□ 0.61
IRF3-217ENST00000597198 RIPK3Q9Y572 518 aa18.87■□□□□ 0.61
IRF3-217ENST00000597198 CCT2P78371 535 aaKnown RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 LACTBP83111 547 aaPredicted RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 CDC37Q16543 378 aaPredicted RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 NOL8Q76FK4 1167 aaKnown RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 RIOX2Q8IUF8 465 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 ZNF296Q8WUU4 475 aaPredicted RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 TEX13BQ9BXU2 312 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 RAVER2Q9HCJ3 691 aaKnown RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 NAP1L2Q9ULW6 460 aaPredicted RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 LIMCH1Q9UPQ0 1083 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 ST18O60284 1047 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 ZBED4O75132 1171 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 ICAM1P05362 532 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 TAL1P17542 331 aaPredicted RBP18.86■□□□□ 0.61
IRF3-217ENST00000597198 SP3Q02447 781 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 STK3Q13188 491 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 QRICH1Q2TAL8 776 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 GTF3C6Q969F1 213 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 AGBL1Q96MI9 1066 aa18.86■□□□□ 0.61
IRF3-217ENST00000597198 CCDC196A0A1B0GTZ2 297 aa18.85■□□□□ 0.61
IRF3-217ENST00000597198 MLLT1Q03111 559 aaPredicted RBP18.85■□□□□ 0.61
IRF3-217ENST00000597198 PIGSQ96S52 555 aa18.85■□□□□ 0.61
IRF3-217ENST00000597198 ARHGAP39Q9C0H5 1083 aa18.85■□□□□ 0.61
IRF3-217ENST00000597198 PLXNA1Q9UIW2 1896 aa18.85■□□□□ 0.61
IRF3-217ENST00000597198 ZBTB5O15062 677 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 CTDNEP1O95476 244 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 IFNAR1P17181 557 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 STAT3P40763 770 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 SNRNP48Q6IEG0 339 aaKnown RBP18.84■□□□□ 0.61
IRF3-217ENST00000597198 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.84■□□□□ 0.61
IRF3-217ENST00000597198 CTU1Q7Z7A3 348 aaKnown RBP18.84■□□□□ 0.61
IRF3-217ENST00000597198 CPXCR1Q8N123 301 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 SHCBP1Q8NEM2 672 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 SLKQ9H2G2 1235 aaPredicted RBP18.84■□□□□ 0.61
IRF3-217ENST00000597198 EFCC1Q9HA90 598 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 VAT1LQ9HCJ6 419 aa18.84■□□□□ 0.61
IRF3-217ENST00000597198 CCDC82Q8N4S0 544 aa18.83■□□□□ 0.61
IRF3-217ENST00000597198 NECAB1Q8N987 351 aa18.83■□□□□ 0.61
IRF3-217ENST00000597198 FKTNO75072 461 aa18.83■□□□□ 0.6
IRF3-217ENST00000597198 ERCC3P19447 782 aa18.83■□□□□ 0.6
IRF3-217ENST00000597198 TRIM47Q96LD4 638 aa18.83■□□□□ 0.6
IRF3-217ENST00000597198 CENPFP49454 3210 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 PNMA6FA0A0J9YX94 578 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 CCNA1P78396 465 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 PLS1Q14651 629 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 HOMER1Q86YM7 354 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 CD99L2Q8TCZ2 262 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 PHKBQ93100 1093 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 CCPG1Q9ULG6 757 aa18.82■□□□□ 0.6
IRF3-217ENST00000597198 hCG_1642624A0A1W2PR95 340 aa18.81■□□□□ 0.6
IRF3-217ENST00000597198 DHX16O60231 1041 aaKnown RBP18.81■□□□□ 0.6
IRF3-217ENST00000597198 SLC25A27O95847 323 aa18.81■□□□□ 0.6
IRF3-217ENST00000597198 PKN1Q16512 942 aa18.81■□□□□ 0.6
IRF3-217ENST00000597198 CLEC4DQ8WXI8 215 aa18.81■□□□□ 0.6
IRF3-217ENST00000597198 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
IRF3-217ENST00000597198 ZSCAN31Q96LW9 406 aaPredicted RBP18.81■□□□□ 0.6
IRF3-217ENST00000597198 RNF26Q9BY78 433 aaPredicted RBP18.81■□□□□ 0.6
IRF3-217ENST00000597198 SH2B1Q9NRF2 756 aaPredicted RBP18.81■□□□□ 0.6
IRF3-217ENST00000597198 OPLAHO14841 1288 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 MAPK4P31152 587 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 MCM2P49736 904 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 PKN2Q16513 984 aaKnown RBP18.8■□□□□ 0.6
IRF3-217ENST00000597198 MUM1L1Q5H9M0 696 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 GPR142Q7Z601 462 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 RRP36Q96EU6 259 aaKnown RBP18.8■□□□□ 0.6
IRF3-217ENST00000597198 MROH8Q9H579 483 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 PRPF3O43395 683 aaKnown RBP18.8■□□□□ 0.6
IRF3-217ENST00000597198 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 COPB2P35606 906 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 PSMC4P43686 418 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 FBXO11Q86XK2 927 aa18.8■□□□□ 0.6
IRF3-217ENST00000597198 NSUN7Q8NE18 718 aaKnown RBP18.8■□□□□ 0.6
IRF3-217ENST00000597198 PIBF1Q8WXW3 757 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms