RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 SWAP70Q9UH65 585 aa22.2■■□□□ 1.15
C19orf48-207ENST00000596655 MYH6P13533 1939 aa22.2■■□□□ 1.14
C19orf48-207ENST00000596655 NR1I2O75469 434 aa22.2■■□□□ 1.14
C19orf48-207ENST00000596655 PABPC4Q13310 644 aaKnown RBP eCLIP22.2■■□□□ 1.14not detected■■□□□ 13.8
C19orf48-207ENST00000596655 AIFM3Q96NN9 605 aa22.2■■□□□ 1.14
C19orf48-207ENST00000596655 GJB4Q9NTQ9 266 aa22.2■■□□□ 1.14
C19orf48-207ENST00000596655 CCDC192P0DO97 292 aa22.19■■□□□ 1.14
C19orf48-207ENST00000596655 CTGFP29279 349 aa22.19■■□□□ 1.14
C19orf48-207ENST00000596655 ADALQ6DHV7 355 aa22.19■■□□□ 1.14
C19orf48-207ENST00000596655 CCDC144CPQ8IYA2 1237 aa22.19■■□□□ 1.14
C19orf48-207ENST00000596655 TRIM22Q8IYM9 498 aa22.19■■□□□ 1.14
C19orf48-207ENST00000596655 ENGASEQ8NFI3 743 aa22.19■■□□□ 1.14
C19orf48-207ENST00000596655 TAOK2Q9UL54 1235 aa22.19■■□□□ 1.14
C19orf48-207ENST00000596655 MPHOSPH10O00566 681 aaKnown RBP22.18■■□□□ 1.14
C19orf48-207ENST00000596655 DDAH1O94760 285 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 DEXIO95424 95 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 CALM1P0DP23 149 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 CALM2P0DP24 149 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 CALM3P0DP25 149 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 GUCY1A2P33402 732 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 RNF214Q8ND24 703 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 FEZ1Q99689 392 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 RNF26Q9BY78 433 aaPredicted RBP22.18■■□□□ 1.14
C19orf48-207ENST00000596655 TNMDQ9H2S6 317 aa22.18■■□□□ 1.14
C19orf48-207ENST00000596655 PSMC4P43686 418 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 SEPT2Q15019 361 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 ZYXQ15942 572 aaKnown RBP22.17■■□□□ 1.14
C19orf48-207ENST00000596655 TRIM47Q96LD4 638 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 SLC26A6Q9BXS9 759 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 ASCC2Q9H1I8 757 aaPredicted RBP22.17■■□□□ 1.14
C19orf48-207ENST00000596655 EMILIN3Q9NT22 766 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 CTAGE5O15320 804 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 OSBPP22059 807 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 CDK8P49336 464 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 SOX10P56693 466 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 CEBPZQ03701 1054 aaKnown RBP22.17■■□□□ 1.14
C19orf48-207ENST00000596655 PDE4BQ07343 736 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 FUT2Q10981 343 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 TROAPQ12815 778 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 SNW1Q13573 536 aaKnown RBP22.17■■□□□ 1.14
C19orf48-207ENST00000596655 TRIM29Q14134 588 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 USP17L2Q6R6M4 530 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 C16orf86Q6ZW13 317 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 CCAR1Q8IX12 1150 aaKnown RBP22.17■■□□□ 1.14
C19orf48-207ENST00000596655 ACER1Q8TDN7 264 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 RBM28Q9NW13 759 aaKnown RBP22.17■■□□□ 1.14
C19orf48-207ENST00000596655 PCDHA7Q9UN72 937 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 PTCH2Q9Y6C5 1203 aa22.17■■□□□ 1.14
C19orf48-207ENST00000596655 GNRH1P01148 92 aa22.16■■□□□ 1.14
C19orf48-207ENST00000596655 FAM160A1Q05DH4 1040 aa22.16■■□□□ 1.14
C19orf48-207ENST00000596655 IFIT1BQ5T764 474 aaKnown RBP22.16■■□□□ 1.14
C19orf48-207ENST00000596655 ANO1Q5XXA6 986 aa22.16■■□□□ 1.14
C19orf48-207ENST00000596655 ANKRD13CQ8N6S4 541 aa22.16■■□□□ 1.14
C19orf48-207ENST00000596655 TRIM44Q96DX7 344 aaPredicted RBP22.16■■□□□ 1.14
C19orf48-207ENST00000596655 CLIC4Q9Y696 253 aa22.16■■□□□ 1.14
C19orf48-207ENST00000596655 DOCK3Q8IZD9 2030 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 AKR1B1P15121 316 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 HOXA7P31268 230 aaPredicted RBP22.15■■□□□ 1.14
C19orf48-207ENST00000596655 IRX3P78415 501 aaPredicted RBP22.15■■□□□ 1.14
C19orf48-207ENST00000596655 TPRNQ4KMQ1 711 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 TMEM179Q6ZVK1 233 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 CATIPQ7Z7H3 387 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 STK11IPQ8N1F8 1099 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 ANKS1AQ92625 1134 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 KIAA1683Q9H0B3 1180 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 GOLPH3LQ9H4A5 285 aa22.15■■□□□ 1.14
C19orf48-207ENST00000596655 SPTLC2O15270 562 aa22.14■■□□□ 1.14
C19orf48-207ENST00000596655 MMP1P03956 469 aa22.14■■□□□ 1.14
C19orf48-207ENST00000596655 ME1P48163 572 aa22.14■■□□□ 1.14
C19orf48-207ENST00000596655 SLC39A14Q15043 492 aa22.14■■□□□ 1.14
C19orf48-207ENST00000596655 STK38Q15208 465 aa22.14■■□□□ 1.14
C19orf48-207ENST00000596655 CCDC73Q6ZRK6 1079 aa22.14■■□□□ 1.14
C19orf48-207ENST00000596655 C12orf42Q96LP6 360 aa22.14■■□□□ 1.14
C19orf48-207ENST00000596655 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.14■■□□□ 1.14
C19orf48-207ENST00000596655 PRDM1O75626 825 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 GCLCP48506 637 aaPredicted RBP22.13■■□□□ 1.13
C19orf48-207ENST00000596655 USP14P54578 494 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 FCGRTP55899 365 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 TYRO3Q06418 890 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 FAM110CQ1W6H9 321 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 MRPS27Q92552 414 aaKnown RBP22.13■■□□□ 1.13
C19orf48-207ENST00000596655 FOXP1Q9H334 677 aaPredicted RBP22.13■■□□□ 1.13
C19orf48-207ENST00000596655 SRRDQ9UH36 339 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 GREB1LQ9C091 1923 aaPredicted RBP22.13■■□□□ 1.13
C19orf48-207ENST00000596655 CENPFP49454 3210 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 PPP6R2O75170 966 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 CAVIN2O95810 425 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 CLEC10AQ8IUN9 316 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 CCDC17Q96LX7 622 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 MRVI1Q9Y6F6 885 aa22.13■■□□□ 1.13
C19orf48-207ENST00000596655 PRPF3O43395 683 aaKnown RBP22.12■■□□□ 1.13
C19orf48-207ENST00000596655 PRMT2P55345 433 aa22.12■■□□□ 1.13
C19orf48-207ENST00000596655 PTPAQ15257 358 aa22.12■■□□□ 1.13
C19orf48-207ENST00000596655 CAMK4Q16566 473 aa22.12■■□□□ 1.13
C19orf48-207ENST00000596655 AXDND1Q5T1B0 1012 aaPredicted RBP22.12■■□□□ 1.13
C19orf48-207ENST00000596655 FMR1NBQ8N0W7 255 aaPredicted RBP22.12■■□□□ 1.13
C19orf48-207ENST00000596655 NUP133Q8WUM0 1156 aa22.12■■□□□ 1.13
C19orf48-207ENST00000596655 ARMC5Q96C12 935 aa22.12■■□□□ 1.13
C19orf48-207ENST00000596655 MAP3K14Q99558 947 aa22.12■■□□□ 1.13
C19orf48-207ENST00000596655 P2RX7Q99572 595 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms