RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 STK32BQ9NY57 414 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 FRMPD2Q68DX3 1309 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 STXBP3O00186 592 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 AOC3Q16853 763 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 ICE2Q659A1 982 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 GOLGA6L1Q8N7Z2 621 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 LZTS2Q9BRK4 669 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 UBA5Q9GZZ9 404 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 MTMR4Q9NYA4 1195 aa19.29■□□□□ 0.68
SHKBP1-205ENST00000594973 ADAMTSL1Q8N6G6 1762 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 TNS1Q9HBL0 1735 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 BMP6P22004 513 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 TRAPPC10P48553 1259 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 MMP14P50281 582 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 GTF2A1P52655 376 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 TCP10Q12799 353 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 NCAPHQ15003 741 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 E4F1Q66K89 784 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 ZFPM1Q8IX07 1006 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 EXOC4Q96A65 974 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 PDGFDQ9GZP0 370 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 PHLPP2Q6ZVD8 1323 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 CCDC194A0A1B0GVG4 234 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 CCP110O43303 1012 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 LMOD1P29536 600 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 SRLQ86TD4 932 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 CCDC150Q8NCX0 1101 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 CCDC148Q8NFR7 591 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 CAMKK2Q96RR4 588 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 SPZ1Q9BXG8 430 aa19.28■□□□□ 0.68
SHKBP1-205ENST00000594973 SLX4Q8IY92 1834 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 MPHOSPH10O00566 681 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 SMC2O95347 1197 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 AFMP43652 599 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 NAPAP54920 295 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 C10orf67Q8IYJ2 551 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 CNKSR1Q969H4 720 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 PCDHA6Q9UN73 950 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 PCDHA8Q9Y5H6 950 aa19.27■□□□□ 0.68
SHKBP1-205ENST00000594973 DACT2Q5SW24 774 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 STRIP1Q5VSL9 837 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 RRP36Q96EU6 259 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 PIGSQ96S52 555 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 SEC63Q9UGP8 760 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 MAN1B1Q9UKM7 699 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 EFCAB8A8MWE9 144 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 NRDCO43847 1150 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 HLA-DOAP06340 250 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 PDHBP11177 359 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 OAS2P29728 719 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 SHMT1P34896 483 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 ATP2B2Q01814 1243 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 IL17AQ16552 155 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 INF2Q27J81 1249 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 ELOA2Q8IYF1 753 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 LRRN4CLQ8ND94 238 aa19.26■□□□□ 0.67
SHKBP1-205ENST00000594973 M0R2N6 131 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 KANK3Q6NY19 840 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 ZDHHC15Q96MV8 337 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 IFNKQ9P0W0 207 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 FOCADQ5VW36 1801 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 FAM196BA6NMK8 535 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 ATP1A3P13637 1013 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 CASP1P29466 404 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 NOVP48745 357 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 MYL5Q02045 173 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 XPO4Q9C0E2 1151 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 SWAP70Q9UH65 585 aa19.25■□□□□ 0.67
SHKBP1-205ENST00000594973 IKBKBO14920 756 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 C21orf2O43822 256 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 TADA3O75528 432 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 ETF1P62495 437 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 SMC1AQ14683 1233 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 RRP15Q9Y3B9 282 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 QSER1Q2KHR3 1735 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 TRIM66O15016 1216 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 TTLL1O95922 423 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 CDC25AP30304 524 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 ZSCAN29Q8IWY8 852 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 C7orf43Q8WVR3 580 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 GPCPD1Q9NPB8 672 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 PLIN4Q96Q06 1357 aa19.24■□□□□ 0.67
SHKBP1-205ENST00000594973 SMCO2A6NFE2 343 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 TBC1D8O95759 1140 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 NT5DC1Q5TFE4 455 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 GALNT17Q6IS24 598 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 DAGLBQ8NCG7 672 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 MNS1Q8NEH6 495 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 STAMQ92783 540 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 LCMT1Q9UIC8 334 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 IVLP07476 585 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 SARSP49591 514 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 HSP90AA4PQ58FG1 418 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 PAGE5Q96GU1 130 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 ZMYND12Q9H0C1 365 aa19.23■□□□□ 0.67
SHKBP1-205ENST00000594973 GUCY2CP25092 1073 aa19.22■□□□□ 0.67
SHKBP1-205ENST00000594973 SOGA3Q5TF21 947 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms