RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 HOXC6P09630 235 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 ERCC3P19447 782 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 PTPREP23469 700 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 KIF5BP33176 963 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 GPR142Q7Z601 462 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 PLEKHH3Q7Z736 793 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 BRF1Q92994 677 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 TBC1D32Q96NH3 1257 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 UPF3BQ9BZI7 483 aaKnown RBP13.06□□□□□ -0.32
XRCC1-204ENST00000594511 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 PDRG1Q9NUG6 133 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 PTPN22Q9Y2R2 807 aa13.06□□□□□ -0.32
XRCC1-204ENST00000594511 ZBTB43O43298 467 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 XRCC5P13010 732 aaKnown RBP13.05□□□□□ -0.32
XRCC1-204ENST00000594511 PDIA3P30101 505 aaKnown RBP13.05□□□□□ -0.32
XRCC1-204ENST00000594511 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 GRB14Q14449 540 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 NFXL1Q6ZNB6 911 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
XRCC1-204ENST00000594511 RGS22Q8NE09 1264 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
XRCC1-204ENST00000594511 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 CPVLQ9H3G5 476 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 RAVER2Q9HCJ3 691 aaKnown RBP13.05□□□□□ -0.32
XRCC1-204ENST00000594511 RBM28Q9NW13 759 aaKnown RBP13.05□□□□□ -0.32
XRCC1-204ENST00000594511 FBXO40Q9UH90 709 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 MTMR7Q9Y216 660 aa13.05□□□□□ -0.32
XRCC1-204ENST00000594511 ZNFX1Q9P2E3 1918 aaKnown RBP13.05□□□□□ -0.32
XRCC1-204ENST00000594511 DNAJC25-GNG10A0A024R161 153 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 KLF18A0A0U1RQI7 1052 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 TNPO2O14787 897 aaKnown RBP13.04□□□□□ -0.32
XRCC1-204ENST00000594511 ZBTB5O15062 677 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
XRCC1-204ENST00000594511 GHRHRQ02643 423 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 NTRK3Q16288 839 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 SNRNP48Q6IEG0 339 aaKnown RBP13.04□□□□□ -0.32
XRCC1-204ENST00000594511 FBXO46Q6PJ61 603 aaPredicted RBP13.04□□□□□ -0.32
XRCC1-204ENST00000594511 SYNE3Q6ZMZ3 975 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 COA7Q96BR5 231 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 AGBL1Q96MI9 1066 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 GABRQQ9UN88 632 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
XRCC1-204ENST00000594511 PLEKHA8P1O95397 391 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 CDC27P30260 824 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 FLT3LGP49771 235 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 IKQ13123 557 aaPredicted RBP13.03□□□□□ -0.32
XRCC1-204ENST00000594511 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
XRCC1-204ENST00000594511 QRICH1Q2TAL8 776 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 COL13A1Q5TAT6 717 aaPredicted RBP13.03□□□□□ -0.32
XRCC1-204ENST00000594511 CPXCR1Q8N123 301 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 SAMD3Q8N6K7 520 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 PXYLP1Q8TE99 480 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 NUP133Q8WUM0 1156 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 SOCS4Q8WXH5 440 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 CLEC4DQ8WXI8 215 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 NUDT12Q9BQG2 462 aa13.03□□□□□ -0.32
XRCC1-204ENST00000594511 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
XRCC1-204ENST00000594511 DIS3Q9Y2L1 958 aaKnown RBP13.03□□□□□ -0.32
XRCC1-204ENST00000594511 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
XRCC1-204ENST00000594511 PNMA6FA0A0J9YX94 578 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 PPP1R11O60927 126 aaPredicted RBP13.02□□□□□ -0.33
XRCC1-204ENST00000594511 RXRAP19793 462 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 NEK4P51957 841 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 AK2P54819 239 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 SNAP25P60880 206 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 PRKCZQ05513 592 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 TRAF1Q13077 416 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 PLS1Q14651 629 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 RTN1Q16799 776 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 MICU3Q86XE3 530 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 NCAPG2Q86XI2 1143 aa13.02□□□□□ -0.33
XRCC1-204ENST00000594511 CTDP1Q9Y5B0 961 aaPredicted RBP13.02□□□□□ -0.33
XRCC1-204ENST00000594511 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 GOLGA8BA8MQT2 603 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 PFKFB2O60825 505 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 COBLO75128 1261 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 FCER1AP12319 257 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 IFNAR1P17181 557 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 ADD1P35611 737 aaKnown RBP13.01□□□□□ -0.33
XRCC1-204ENST00000594511 METAP2P50579 478 aaKnown RBP eCLIP13.01□□□□□ -0.33
XRCC1-204ENST00000594511 FGD1P98174 961 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 RABEP1Q15276 862 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 ZNF792Q3KQV3 632 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 CCDC174Q6PII3 467 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
XRCC1-204ENST00000594511 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 TEX2Q8IWB9 1127 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 TRERF1Q96PN7 1200 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 PIGSQ96S52 555 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 AMNQ9BXJ7 453 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 ACAD9Q9H845 621 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 RNF146Q9NTX7 359 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 CCPG1Q9ULG6 757 aa13.01□□□□□ -0.33
XRCC1-204ENST00000594511 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms