RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 UBE2Q1Q7Z7E8 422 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 MSL3Q8N5Y2 521 aaKnown RBP20.35■□□□□ 0.85
IRF3-208ENST00000594387 ARRDC4Q8NCT1 418 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 TRERF1Q96PN7 1200 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 MCM3APO60318 1980 aa20.35■□□□□ 0.85
IRF3-208ENST00000594387 SEPT4O43236 478 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 PDHBP11177 359 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 SLC16A2P36021 539 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 LHX8Q68G74 356 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 BTNL9Q6UXG8 535 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 PNMA1Q8ND90 353 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 AGBL1Q96MI9 1066 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 IL25Q9H293 177 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 RNF146Q9NTX7 359 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 CCPG1Q9ULG6 757 aa20.34■□□□□ 0.85
IRF3-208ENST00000594387 TNRC18O15417 2968 aaPredicted RBP20.34■□□□□ 0.85
IRF3-208ENST00000594387 CENPFP49454 3210 aa20.33■□□□□ 0.85
IRF3-208ENST00000594387 TNKSO95271 1327 aa20.33■□□□□ 0.85
IRF3-208ENST00000594387 PTH1RQ03431 593 aa20.33■□□□□ 0.85
IRF3-208ENST00000594387 ZNF543Q08ER8 600 aa20.33■□□□□ 0.85
IRF3-208ENST00000594387 SART3Q15020 963 aaKnown RBP20.33■□□□□ 0.85
IRF3-208ENST00000594387 IFIT1BQ5T764 474 aaKnown RBP20.33■□□□□ 0.85
IRF3-208ENST00000594387 TTBK2Q6IQ55 1244 aa20.33■□□□□ 0.85
IRF3-208ENST00000594387 NCOA7Q8NI08 942 aa20.33■□□□□ 0.85
IRF3-208ENST00000594387 ANKS1AQ92625 1134 aa20.33■□□□□ 0.85
IRF3-208ENST00000594387 PFASO15067 1338 aa20.32■□□□□ 0.84
IRF3-208ENST00000594387 POTEB2H3BUK9 544 aa20.32■□□□□ 0.84
IRF3-208ENST00000594387 ICAM1P05362 532 aa20.32■□□□□ 0.84
IRF3-208ENST00000594387 SNAP25P60880 206 aa20.32■□□□□ 0.84
IRF3-208ENST00000594387 BMP2KLQ5H9B9 411 aa20.32■□□□□ 0.84
IRF3-208ENST00000594387 PRAMEF19Q5SWL8 479 aa20.32■□□□□ 0.84
IRF3-208ENST00000594387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.32■□□□□ 0.84
IRF3-208ENST00000594387 DIS3LQ8TF46 1054 aaKnown RBP20.32■□□□□ 0.84
IRF3-208ENST00000594387 RANBP17Q9H2T7 1088 aaKnown RBP20.32■□□□□ 0.84
IRF3-208ENST00000594387 ALPK3Q96L96 1907 aa20.31■□□□□ 0.84
IRF3-208ENST00000594387 SYNGAP1Q96PV0 1343 aa20.31■□□□□ 0.84
IRF3-208ENST00000594387 KBTBD13C9JR72 458 aa20.31■□□□□ 0.84
IRF3-208ENST00000594387 MYCNP04198 464 aaPredicted RBP20.31■□□□□ 0.84
IRF3-208ENST00000594387 CYP21A2P08686 494 aa20.31■□□□□ 0.84
IRF3-208ENST00000594387 RASGRP2Q7LDG7 609 aa20.31■□□□□ 0.84
IRF3-208ENST00000594387 ZNF467Q7Z7K2 595 aaPredicted RBP20.31■□□□□ 0.84
IRF3-208ENST00000594387 TRPV1Q8NER1 839 aa20.31■□□□□ 0.84
IRF3-208ENST00000594387 MAP4K1Q92918 833 aa20.31■□□□□ 0.84
IRF3-208ENST00000594387 ZNF536O15090 1300 aa20.3■□□□□ 0.84
IRF3-208ENST00000594387 DNAJC25-GNG10A0A024R161 153 aa20.3■□□□□ 0.84
IRF3-208ENST00000594387 DHX16O60231 1041 aaKnown RBP20.3■□□□□ 0.84
IRF3-208ENST00000594387 IGHA2P01877 340 aa20.3■□□□□ 0.84
IRF3-208ENST00000594387 PARP1P09874 1014 aaKnown RBP20.3■□□□□ 0.84
IRF3-208ENST00000594387 RARBP10826 455 aa20.3■□□□□ 0.84
IRF3-208ENST00000594387 ASPRV1Q53RT3 343 aa20.3■□□□□ 0.84
IRF3-208ENST00000594387 ENAHQ8N8S7 591 aaPredicted RBP20.3■□□□□ 0.84
IRF3-208ENST00000594387 GOLGA8HP0CJ92 632 aa20.29■□□□□ 0.84
IRF3-208ENST00000594387 SNHG28P0DPA3 235 aa20.29■□□□□ 0.84
IRF3-208ENST00000594387 AKR1A1P14550 325 aa20.29■□□□□ 0.84
IRF3-208ENST00000594387 MAMDC4Q6UXC1 1216 aa20.29■□□□□ 0.84
IRF3-208ENST00000594387 NSMFQ6X4W1 530 aa20.29■□□□□ 0.84
IRF3-208ENST00000594387 ESYT1Q9BSJ8 1104 aa20.29■□□□□ 0.84
IRF3-208ENST00000594387 RBM8AQ9Y5S9 174 aaKnown RBP20.29■□□□□ 0.84
IRF3-208ENST00000594387 ASB14A6NK59 587 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 E7EWF7 191 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 H0YGN5 161 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 DNM1LO00429 736 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
IRF3-208ENST00000594387 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
IRF3-208ENST00000594387 ANO1Q5XXA6 986 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 SENP6Q9GZR1 1112 aaPredicted RBP20.28■□□□□ 0.84
IRF3-208ENST00000594387 ABHD16BQ9H3Z7 469 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 ANO2Q9NQ90 1003 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 ZHX1Q9UKY1 873 aaPredicted RBP20.28■□□□□ 0.84
IRF3-208ENST00000594387 FAM184BQ9ULE4 1060 aa20.28■□□□□ 0.84
IRF3-208ENST00000594387 WTAPQ15007 396 aa20.27■□□□□ 0.84
IRF3-208ENST00000594387 RNF20Q5VTR2 975 aa20.27■□□□□ 0.84
IRF3-208ENST00000594387 MPHOSPH6Q99547 160 aaKnown RBP20.27■□□□□ 0.84
IRF3-208ENST00000594387 A1CFQ9NQ94 594 aaKnown RBP20.27■□□□□ 0.84
IRF3-208ENST00000594387 XPNPEP3Q9NQH7 507 aa20.27■□□□□ 0.84
IRF3-208ENST00000594387 ADD3Q9UEY8 706 aaKnown RBP20.27■□□□□ 0.84
IRF3-208ENST00000594387 PTPDC1A2A3K4 754 aa20.26■□□□□ 0.83
IRF3-208ENST00000594387 MNX1P50219 401 aaPredicted RBP20.26■□□□□ 0.83
IRF3-208ENST00000594387 MUM1L1Q5H9M0 696 aa20.26■□□□□ 0.83
IRF3-208ENST00000594387 GJC2Q5T442 439 aaPredicted RBP20.26■□□□□ 0.83
IRF3-208ENST00000594387 CYB5R4Q7L1T6 521 aa20.26■□□□□ 0.83
IRF3-208ENST00000594387 RNF180Q86T96 592 aa20.26■□□□□ 0.83
IRF3-208ENST00000594387 UBA5Q9GZZ9 404 aa20.26■□□□□ 0.83
IRF3-208ENST00000594387 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.26■□□□□ 0.83
IRF3-208ENST00000594387 B4DLN1 442 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 CDC45O75419 566 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 SNAI1O95863 264 aaPredicted RBP20.25■□□□□ 0.83
IRF3-208ENST00000594387 ZNF865P0CJ78 1059 aaPredicted RBP20.25■□□□□ 0.83
IRF3-208ENST00000594387 MRPL12P52815 198 aaKnown RBP20.25■□□□□ 0.83
IRF3-208ENST00000594387 CNTN2Q02246 1040 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 ACVR2BQ13705 512 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 ARMCX2Q7L311 632 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 C7orf61Q8IZ16 206 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 FAM133AQ8N9E0 248 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 SPC25Q9HBM1 224 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 VAT1LQ9HCJ6 419 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 CYP39A1Q9NYL5 469 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 WDR19Q8NEZ3 1342 aa20.25■□□□□ 0.83
IRF3-208ENST00000594387 COL6A1P12109 1028 aa20.24■□□□□ 0.83
IRF3-208ENST00000594387 TAL1P17542 331 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms