RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 SIAH1Q8IUQ4 282 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 PDILTQ8N807 584 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 C4orf32Q8N8J7 132 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 MTMR8Q96EF0 704 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 GMCL1Q96IK5 515 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 EPSTI1Q96J88 318 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 BPIFA3Q9BQP9 254 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 SYNPO2Q9UMS6 1093 aa13.58□□□□□ -0.24
NPC1-214ENST00000593280 LAD1O00515 517 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 LONP1P36776 959 aaKnown RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 PTGER2P43116 358 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 JAG1P78504 1218 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 RRP1BQ14684 758 aaKnown RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 DHX40Q8IX18 779 aaKnown RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 AOPEPQ8N6M6 819 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 DHX58Q96C10 678 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 TMEM39BQ9GZU3 492 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 ATAD5Q96QE3 1844 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 F5H6K3 240 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 WNT10BO00744 389 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 FOXN1O15353 648 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 TBC1D12O60347 775 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 PPP1R11O60927 126 aaPredicted RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 NDUFB10O96000 172 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 TNNI2P48788 182 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 ZNF280AP59817 542 aaPredicted RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 MDM2Q00987 491 aaPredicted RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 RASSF7Q02833 373 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 KLRC3Q07444 240 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 NBPF9Q3BBW0 867 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 JAKMIP3Q5VZ66 844 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
NPC1-214ENST00000593280 BIN2Q9UBW5 565 aaPredicted RBP13.57□□□□□ -0.24
NPC1-214ENST00000593280 A0A087X0B3 334 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 SLFN14P0C7P3 912 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 TXLNAP40222 546 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 PRPHP41219 470 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 ORC2Q13416 577 aaPredicted RBP13.56□□□□□ -0.24
NPC1-214ENST00000593280 IL17AQ16552 155 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 ZSCAN30Q86W11 494 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 TBCKQ8TEA7 893 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 CUL5Q93034 780 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 TMEM260Q9NX78 707 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 PCDHA5Q9Y5H7 936 aa13.56□□□□□ -0.24
NPC1-214ENST00000593280 SHTN1A0MZ66 631 aa13.55□□□□□ -0.24
NPC1-214ENST00000593280 NEMFO60524 1076 aa13.55□□□□□ -0.24
NPC1-214ENST00000593280 CCNT1O60563 726 aaKnown RBP13.55□□□□□ -0.24
NPC1-214ENST00000593280 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
NPC1-214ENST00000593280 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
NPC1-214ENST00000593280 CDC37Q16543 378 aaPredicted RBP13.55□□□□□ -0.24
NPC1-214ENST00000593280 QRICH1Q2TAL8 776 aa13.55□□□□□ -0.24
NPC1-214ENST00000593280 SMARCE1Q969G3 411 aa13.55□□□□□ -0.24
NPC1-214ENST00000593280 NUP88Q99567 741 aaPredicted RBP13.55□□□□□ -0.24
NPC1-214ENST00000593280 TRIM5Q9C035 493 aa13.55□□□□□ -0.24
NPC1-214ENST00000593280 TMEM60Q9H2L4 133 aa13.55□□□□□ -0.24
NPC1-214ENST00000593280 RRAGDQ9NQL2 400 aaPredicted RBP13.55□□□□□ -0.24
NPC1-214ENST00000593280 SMC2O95347 1197 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 OR52Z1P0C646 297 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 BMP3P12645 472 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 GMPSP49915 693 aaPredicted RBP13.54□□□□□ -0.24
NPC1-214ENST00000593280 ZNF75DP51815 510 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 MRPL12P52815 198 aaKnown RBP13.54□□□□□ -0.24
NPC1-214ENST00000593280 TPM4P67936 248 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 TNFAIP1Q13829 316 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 NT5DC1Q5TFE4 455 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 SARM1Q6SZW1 724 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 GRAMD1CQ8IYS0 662 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 IQUBQ8NA54 791 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 GLT8D2Q9H1C3 349 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 GOPCQ9HD26 462 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 RTN4Q9NQC3 1192 aaKnown RBP13.54□□□□□ -0.24
NPC1-214ENST00000593280 MAN1B1Q9UKM7 699 aa13.54□□□□□ -0.24
NPC1-214ENST00000593280 A0A1W2PRG0 241 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 SMTNL1A8MU46 457 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 GOLGA6L6A8MZA4 724 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 TMEM232C9JQI7 657 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 FZD9O00144 591 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 MSNP26038 577 aaKnown RBP13.53□□□□□ -0.24
NPC1-214ENST00000593280 SYDE2Q5VT97 1194 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
NPC1-214ENST00000593280 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 MICALL2Q8IY33 904 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 TRIML1Q8N9V2 468 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 NLGN2Q8NFZ4 835 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 PAGE5Q96GU1 130 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 PSTPIP2Q9H939 334 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 PGAP2Q9UHJ9 254 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 GJA3Q9Y6H8 435 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 UTRNP46939 3433 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 ECE1P42892 770 aa13.53□□□□□ -0.24
NPC1-214ENST00000593280 SARSP49591 514 aaKnown RBP13.53□□□□□ -0.24
NPC1-214ENST00000593280 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms