RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 OTUD7AQ8TE49 926 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 APPBP2Q92624 585 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 PBX4Q9BYU1 374 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 KATNBL1Q9H079 304 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 ZNF576Q9H609 170 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 LRRC37A2A6NM11 1700 aa13.39□□□□□ -0.27
PRKCSH-220ENST00000593104 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 MOXD2PA6NHM9 499 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 RNF113AO15541 343 aaKnown RBP13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 MS4A1P11836 297 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 COPB2P35606 906 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 CDK7P50613 346 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 GNASQ5JWF2 1037 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 MFSD5Q6N075 450 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 ZNF365Q70YC5 407 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 EEPD1Q7L9B9 569 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 FAM126BQ8IXS8 530 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 TIFAQ96CG3 184 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 GLT1D1Q96MS3 346 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 TOX2Q96NM4 488 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 MTMR4Q9NYA4 1195 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 CXXC1Q9P0U4 656 aaPredicted RBP13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 LCTP09848 1927 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 ZNF536O15090 1300 aa13.38□□□□□ -0.27
PRKCSH-220ENST00000593104 VCANP13611 3396 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 SOWAHBA6NEL2 793 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 TMEM232C9JQI7 657 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 NMT2O60551 498 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 CCDC174Q6PII3 467 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 CXCL17Q6UXB2 119 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 CCDC129Q6ZRS4 1044 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 PPP1R13LQ8WUF5 828 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 PRDM12Q9H4Q4 367 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 A1CFQ9NQ94 594 aaKnown RBP13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 PDGFCQ9NRA1 345 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 MYO9BQ13459 2157 aa13.37□□□□□ -0.27
PRKCSH-220ENST00000593104 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 ARVCFO00192 962 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 ATP2A1O14983 1001 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 TTLL1O95922 423 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 BMP3P12645 472 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 MCCP23508 829 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 GJA9P57773 515 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 PSMC6P62333 389 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 TFAP4Q01664 338 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 ADGRE1Q14246 886 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 KCTD1Q719H9 257 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 ZNF467Q7Z7K2 595 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 FBXO16Q8IX29 292 aaPredicted RBP13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 ABHD16BQ9H3Z7 469 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 RAPGEFL1Q9UHV5 662 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 FEM1BQ9UK73 627 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 GRIN2DO15399 1336 aa13.36□□□□□ -0.27
PRKCSH-220ENST00000593104 TMEM265A0A087WTH1 108 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 TSPY3P0CV98 308 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 TSPY8P0CW00 308 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 ALAS1P13196 640 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 SMPD1P17405 629 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 CCL23P55773 120 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 FAM133AQ8N9E0 248 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 PCSK9Q8NBP7 692 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 CHST13Q8NET6 341 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 MKL1Q969V6 931 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 NKX2-4Q9H2Z4 354 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 YBX2Q9Y2T7 364 aaKnown RBP13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 ELP1O95163 1332 aa13.35□□□□□ -0.27
PRKCSH-220ENST00000593104 PATL2C9JE40 543 aaKnown RBP13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 FOXP2O15409 715 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 CD4P01730 458 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 MYOGP15173 224 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 RABGGTBP53611 331 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 TNFAIP2Q03169 654 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 PPARAQ07869 468 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 PPIGQ13427 754 aaKnown RBP eCLIP13.34□□□□□ -0.273e-8■□□□□ 8.3
PRKCSH-220ENST00000593104 RASIP1Q5U651 963 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 GIMAP6Q6P9H5 292 aa13.34□□□□□ -0.27
PRKCSH-220ENST00000593104 OTOP2Q7RTS6 562 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms