RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 RLFQ13129 1914 aa29.4■■■□□ 2.3
LDLRAD4-218ENST00000592991 LOC285556D6RIA3 1793 aa29.4■■■□□ 2.3
LDLRAD4-218ENST00000592991 SMCO2A6NFE2 343 aa29.4■■■□□ 2.3
LDLRAD4-218ENST00000592991 MYSM1Q5VVJ2 828 aa29.4■■■□□ 2.3
LDLRAD4-218ENST00000592991 NOSTRINQ8IVI9 506 aa29.4■■■□□ 2.3
LDLRAD4-218ENST00000592991 RANBP17Q9H2T7 1088 aaKnown RBP29.4■■■□□ 2.3
LDLRAD4-218ENST00000592991 PCDHA4Q9UN74 947 aa29.4■■■□□ 2.3
LDLRAD4-218ENST00000592991 KIF3CO14782 793 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 CEBPZQ03701 1054 aaKnown RBP29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 PPIL2Q13356 520 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 NBR1Q14596 966 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 TREML2Q5T2D2 321 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 BLIDQ8IZY5 108 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 C2orf69Q8N8R5 385 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 RBM46Q8TBY0 533 aaKnown RBP29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 TNFRSF25Q93038 417 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 SLC10A4Q96EP9 437 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 BRMS1Q9HCU9 246 aa29.39■■■□□ 2.3
LDLRAD4-218ENST00000592991 hCG_1984214I3L0E3 225 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 CALML3P27482 149 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 GADL1Q6ZQY3 521 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 FBXO11Q86XK2 927 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 ZNF713Q8N859 430 aaPredicted RBP29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 USP28Q96RU2 1077 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 ZMYND12Q9H0C1 365 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 PCDHA1Q9Y5I3 950 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 FKBP1BP68106 108 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 KRT85P78386 507 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 CCDC12Q8WUD4 166 aaPredicted RBP29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 WNK4Q96J92 1243 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 AMNQ9BXJ7 453 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 PPP1R9AQ9ULJ8 1098 aa29.38■■■□□ 2.29
LDLRAD4-218ENST00000592991 A0A0G2JLL6 359 aaPredicted RBP29.37■■■□□ 2.29
LDLRAD4-218ENST00000592991 PRRT2Q7Z6L0 340 aaPredicted RBP29.37■■■□□ 2.29
LDLRAD4-218ENST00000592991 PRPF38AQ8NAV1 312 aaKnown RBP29.37■■■□□ 2.29
LDLRAD4-218ENST00000592991 ATG4CQ96DT6 458 aa29.37■■■□□ 2.29
LDLRAD4-218ENST00000592991 KCNH4Q9UQ05 1017 aa29.37■■■□□ 2.29
LDLRAD4-218ENST00000592991 MKRN3Q13064 507 aaKnown RBP29.36■■■□□ 2.29
LDLRAD4-218ENST00000592991 DAGLBQ8NCG7 672 aa29.36■■■□□ 2.29
LDLRAD4-218ENST00000592991 COL11A1P12107 1806 aaPredicted RBP29.35■■■□□ 2.29
LDLRAD4-218ENST00000592991 M0R2N6 131 aa29.35■■■□□ 2.29
LDLRAD4-218ENST00000592991 PPP1R18Q6NYC8 613 aa29.35■■■□□ 2.29
LDLRAD4-218ENST00000592991 C6orf50Q9HD87 102 aa29.35■■■□□ 2.29
LDLRAD4-218ENST00000592991 PCDHA6Q9UN73 950 aa29.35■■■□□ 2.29
LDLRAD4-218ENST00000592991 PCDHA8Q9Y5H6 950 aa29.35■■■□□ 2.29
LDLRAD4-218ENST00000592991 ESYT2A0FGR8 921 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 CXCL11O14625 94 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 PRPF40AO75400 957 aaKnown RBP29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 ADCY7P51828 1080 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 CATSPERGQ6ZRH7 1159 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 TMEM260Q9NX78 707 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 UBE2SQ16763 222 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 PIK3AP1Q6ZUJ8 805 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 ZNF396Q96N95 335 aaPredicted RBP29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 CLIC4Q9Y696 253 aa29.34■■■□□ 2.29
LDLRAD4-218ENST00000592991 ZNF536O15090 1300 aa29.33■■■□□ 2.29
LDLRAD4-218ENST00000592991 DDX11L8A8MPP1 907 aa29.33■■■□□ 2.29
LDLRAD4-218ENST00000592991 ATP2B1P20020 1258 aa29.33■■■□□ 2.29
LDLRAD4-218ENST00000592991 TOB1P50616 345 aaPredicted RBP29.33■■■□□ 2.29
LDLRAD4-218ENST00000592991 TPRNQ4KMQ1 711 aa29.33■■■□□ 2.29
LDLRAD4-218ENST00000592991 AGBL1Q96MI9 1066 aa29.33■■■□□ 2.29
LDLRAD4-218ENST00000592991 BIN2Q9UBW5 565 aaPredicted RBP29.33■■■□□ 2.29
LDLRAD4-218ENST00000592991 USP17L15C9J2P7 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L13C9JLJ4 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L11C9JVI0 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L18D6R9N7 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L22D6RA61 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L17D6RBQ6 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L19D6RCP7 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L20D6RJB6 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 GOLGA6L22H0YM25 854 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 GNA11P29992 359 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L24Q0WX57 530 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 MOGSQ13724 837 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 JAKMIP3Q5VZ66 844 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 GALNT17Q6IS24 598 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 CPXCR1Q8N123 301 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 FAM177A1Q8N128 213 aaPredicted RBP29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 SLC38A10Q9HBR0 1119 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 RAVER2Q9HCJ3 691 aaKnown RBP29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 LMBRD1Q9NUN5 540 aa29.32■■■□□ 2.28
LDLRAD4-218ENST00000592991 WNT7AO00755 349 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 DSG3P32926 999 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 LEO1Q8WVC0 666 aaPredicted RBP29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 PGBD1Q96JS3 809 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 RIC8AQ9NPQ8 531 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 PASKQ96RG2 1323 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 UNCXA6NJT0 531 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 HUNKP57058 714 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 REXO1Q8N1G1 1221 aaKnown RBP29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 SPATA32Q96LK8 384 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 PSTPIP2Q9H939 334 aa29.31■■■□□ 2.28
LDLRAD4-218ENST00000592991 VWA5AO00534 786 aa29.3■■■□□ 2.28
LDLRAD4-218ENST00000592991 OPLAHO14841 1288 aa29.3■■■□□ 2.28
LDLRAD4-218ENST00000592991 GADD45BO75293 160 aaPredicted RBP29.3■■■□□ 2.28
LDLRAD4-218ENST00000592991 COG2Q14746 738 aa29.3■■■□□ 2.28
LDLRAD4-218ENST00000592991 PROCA1Q8NCQ7 364 aaPredicted RBP29.3■■■□□ 2.28
LDLRAD4-218ENST00000592991 CUL5Q93034 780 aa29.3■■■□□ 2.28
LDLRAD4-218ENST00000592991 CCPG1Q9ULG6 757 aa29.3■■■□□ 2.28
LDLRAD4-218ENST00000592991 USP17L6PQ6QN14 398 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms