RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 FGD4Q96M96 766 aa27.49■■□□□ 1.99
MBD3-211ENST00000592965 ACAD9Q9H845 621 aa27.49■■□□□ 1.99
MBD3-211ENST00000592965 MYCNP04198 464 aaPredicted RBP27.48■■□□□ 1.99
MBD3-211ENST00000592965 HAND2P61296 217 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 TKFCQ3LXA3 575 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 SLC39A5Q6ZMH5 540 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 RASGRP2Q7LDG7 609 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 CHMP4CQ96CF2 233 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 HOMER2Q9NSB8 354 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 PRR12Q9ULL5 1215 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 PHF24Q9UPV7 400 aa27.48■■□□□ 1.99
MBD3-211ENST00000592965 TOP1P11387 765 aaKnown RBP27.47■■□□□ 1.99
MBD3-211ENST00000592965 ADCYAP1R1P41586 468 aa27.47■■□□□ 1.99
MBD3-211ENST00000592965 AKNAD1Q5T1N1 836 aa27.47■■□□□ 1.99
MBD3-211ENST00000592965 RNF180Q86T96 592 aa27.47■■□□□ 1.99
MBD3-211ENST00000592965 AGBL1Q96MI9 1066 aa27.47■■□□□ 1.99
MBD3-211ENST00000592965 UBE2OQ9C0C9 1292 aaKnown RBP27.47■■□□□ 1.99
MBD3-211ENST00000592965 RNF146Q9NTX7 359 aa27.47■■□□□ 1.99
MBD3-211ENST00000592965 HIP1O00291 1037 aa27.46■■□□□ 1.99
MBD3-211ENST00000592965 SOX1O00570 391 aaPredicted RBP27.46■■□□□ 1.99
MBD3-211ENST00000592965 C1orf53Q5VUE5 145 aa27.46■■□□□ 1.99
MBD3-211ENST00000592965 TBC1D10CQ8IV04 446 aa27.46■■□□□ 1.99
MBD3-211ENST00000592965 TDHQ8IZJ6 230 aa27.46■■□□□ 1.99
MBD3-211ENST00000592965 TMEM47Q9BQJ4 181 aa27.46■■□□□ 1.99
MBD3-211ENST00000592965 RNF41Q9H4P4 317 aaPredicted RBP27.46■■□□□ 1.99
MBD3-211ENST00000592965 DIAPH3Q9NSV4 1193 aa27.46■■□□□ 1.99
MBD3-211ENST00000592965 SUPT16HQ9Y5B9 1047 aaKnown RBP27.46■■□□□ 1.99
MBD3-211ENST00000592965 PGK1P00558 417 aa27.45■■□□□ 1.98
MBD3-211ENST00000592965 CCDC96Q2M329 555 aa27.45■■□□□ 1.98
MBD3-211ENST00000592965 MFSD6Q6ZSS7 791 aa27.45■■□□□ 1.98
MBD3-211ENST00000592965 FAM133AQ8N9E0 248 aa27.45■■□□□ 1.98
MBD3-211ENST00000592965 LENG1Q96BZ8 264 aaPredicted RBP27.45■■□□□ 1.98
MBD3-211ENST00000592965 A1CFQ9NQ94 594 aaKnown RBP27.45■■□□□ 1.98
MBD3-211ENST00000592965 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.45■■□□□ 1.98
MBD3-211ENST00000592965 ZHX1Q9UKY1 873 aaPredicted RBP27.45■■□□□ 1.98
MBD3-211ENST00000592965 FAM184BQ9ULE4 1060 aa27.45■■□□□ 1.98
MBD3-211ENST00000592965 ATP11BQ9Y2G3 1177 aa27.45■■□□□ 1.98
MBD3-211ENST00000592965 ADAMTS4O75173 837 aa27.44■■□□□ 1.98
MBD3-211ENST00000592965 CWC27Q6UX04 472 aaKnown RBP27.44■■□□□ 1.98
MBD3-211ENST00000592965 BTNL9Q6UXG8 535 aa27.44■■□□□ 1.98
MBD3-211ENST00000592965 FERMT2Q96AC1 680 aa27.44■■□□□ 1.98
MBD3-211ENST00000592965 ABHD16BQ9H3Z7 469 aa27.44■■□□□ 1.98
MBD3-211ENST00000592965 MTMR7Q9Y216 660 aa27.44■■□□□ 1.98
MBD3-211ENST00000592965 LAMA2P24043 3122 aaKnown RBP27.43■■□□□ 1.98
MBD3-211ENST00000592965 POTEB2H3BUK9 544 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 NT5C2P49902 561 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 MDM2Q00987 491 aaPredicted RBP27.43■■□□□ 1.98
MBD3-211ENST00000592965 ACVR2BQ13705 512 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 LRIT3Q3SXY7 679 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 TRIM60Q495X7 471 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 CCDC174Q6PII3 467 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 ARMCX2Q7L311 632 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 TTC14Q96N46 770 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 TRERF1Q96PN7 1200 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 PRKAG2Q9UGJ0 569 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 LRRC37A2A6NM11 1700 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 LCTP09848 1927 aa27.43■■□□□ 1.98
MBD3-211ENST00000592965 SYNRGQ9UMZ2 1314 aa27.42■■□□□ 1.98
MBD3-211ENST00000592965 DUSP11O75319 330 aaKnown RBP27.42■■□□□ 1.98
MBD3-211ENST00000592965 ALAS1P13196 640 aa27.42■■□□□ 1.98
MBD3-211ENST00000592965 LRCH3Q96II8 777 aa27.42■■□□□ 1.98
MBD3-211ENST00000592965 LBHD1Q9BQE6 289 aaPredicted RBP27.42■■□□□ 1.98
MBD3-211ENST00000592965 TSEN34Q9BSV6 310 aaKnown RBP27.42■■□□□ 1.98
MBD3-211ENST00000592965 RANBP17Q9H2T7 1088 aaKnown RBP27.42■■□□□ 1.98
MBD3-211ENST00000592965 NEDD4P46934 1319 aa27.41■■□□□ 1.98
MBD3-211ENST00000592965 ICAM1P05362 532 aa27.41■■□□□ 1.98
MBD3-211ENST00000592965 SNAP25P60880 206 aa27.41■■□□□ 1.98
MBD3-211ENST00000592965 CNTN2Q02246 1040 aa27.41■■□□□ 1.98
MBD3-211ENST00000592965 CCDC144CPQ8IYA2 1237 aa27.41■■□□□ 1.98
MBD3-211ENST00000592965 ESR2Q92731 530 aa27.41■■□□□ 1.98
MBD3-211ENST00000592965 CCPG1Q9ULG6 757 aa27.41■■□□□ 1.98
MBD3-211ENST00000592965 A0A1W2PQ45 241 aaPredicted RBP27.4■■□□□ 1.98
MBD3-211ENST00000592965 A0A1W2PQY0 241 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 ZNF213O14771 459 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 PDHBP11177 359 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 SYDE2Q5VT97 1194 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 TTBK2Q6IQ55 1244 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 KLHDC9Q8NEP7 349 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 DSCC1Q9BVC3 393 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 KATNBL1Q9H079 304 aa27.4■■□□□ 1.98
MBD3-211ENST00000592965 CCDC144BQ3MJ40 725 aa27.39■■□□□ 1.98
MBD3-211ENST00000592965 GPR153Q6NV75 609 aa27.39■■□□□ 1.98
MBD3-211ENST00000592965 PDLIM7Q9NR12 457 aa27.39■■□□□ 1.98
MBD3-211ENST00000592965 SOWAHBA6NEL2 793 aa27.38■■□□□ 1.97
MBD3-211ENST00000592965 SNHG28P0DPA3 235 aa27.38■■□□□ 1.97
MBD3-211ENST00000592965 CST5P28325 142 aaPredicted RBP27.38■■□□□ 1.97
MBD3-211ENST00000592965 SLC16A2P36021 539 aa27.38■■□□□ 1.97
MBD3-211ENST00000592965 MUM1L1Q5H9M0 696 aa27.38■■□□□ 1.97
MBD3-211ENST00000592965 UPF3AQ9H1J1 476 aaKnown RBP27.38■■□□□ 1.97
MBD3-211ENST00000592965 CYP39A1Q9NYL5 469 aa27.38■■□□□ 1.97
MBD3-211ENST00000592965 FRMPD2Q68DX3 1309 aaPredicted RBP27.38■■□□□ 1.97
MBD3-211ENST00000592965 MOXD2PA6NHM9 499 aa27.37■■□□□ 1.97
MBD3-211ENST00000592965 ASB14A6NK59 587 aa27.37■■□□□ 1.97
MBD3-211ENST00000592965 ADCY6O43306 1168 aa27.37■■□□□ 1.97
MBD3-211ENST00000592965 PDE4AP27815 886 aa27.37■■□□□ 1.97
MBD3-211ENST00000592965 ACLYP53396 1101 aa27.37■■□□□ 1.97
MBD3-211ENST00000592965 TLE2Q04725 743 aa27.37■■□□□ 1.97
MBD3-211ENST00000592965 ZNF543Q08ER8 600 aa27.37■■□□□ 1.97
MBD3-211ENST00000592965 CCSAPQ6IQ19 270 aaPredicted RBP27.37■■□□□ 1.97
MBD3-211ENST00000592965 GPCPD1Q9NPB8 672 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms