RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 FRAT1Q92837 279 aaPredicted RBP12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 VWCEQ96DN2 955 aa12.2□□□□□ -0.46
SMCO4P1-201ENST00000592909 GRIN2DO15399 1336 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 USP17L12C9JPN9 530 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 USP17L21D6R901 530 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 PRKAB2O43741 272 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 ATP2A2P16615 1042 aaKnown RBP12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 BEX3Q00994 111 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 ERC1Q8IUD2 1116 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 ANKRD35Q8N283 1001 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 CHST13Q8NET6 341 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 ARMT1Q9H993 441 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 FBXO40Q9UH90 709 aa12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 PRRC2BQ5JSZ5 2229 aaKnown RBP12.19□□□□□ -0.46
SMCO4P1-201ENST00000592909 ASTN1O14525 1302 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 TCF20Q9UGU0 1960 aaKnown RBP12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 CYP2D7A0A087X1C5 515 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 RFXAPO00287 272 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 RAD21O60216 631 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 ZBED4O75132 1171 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 PFKMP08237 780 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 TMEM67Q5HYA8 995 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 AMOTL1Q8IY63 956 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 TRPV6Q9H1D0 765 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 SLC38A10Q9HBR0 1119 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 C11orf16Q9NQ32 467 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 PARP14Q460N5 1801 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 MUC6Q6W4X9 2439 aa12.18□□□□□ -0.46
SMCO4P1-201ENST00000592909 NAV1Q8NEY1 1877 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 CHD7Q9P2D1 2997 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 ZBBXA8MT70 800 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 F5H6K3 240 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 GOLIM4O00461 696 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 ZEB2O60315 1214 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 B4GALT4O60513 344 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 MBD4O95243 580 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 NDUFB10O96000 172 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 CA3P07451 260 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 OAZ1P54368 228 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 KLRC3Q07444 240 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 ZKSCAN2Q63HK3 967 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 HLA-CQ95604 372 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 RAVER2Q9HCJ3 691 aaKnown RBP12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 NYAP2Q9P242 653 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 Q9Y3F1 56 aa12.17□□□□□ -0.46
SMCO4P1-201ENST00000592909 ZBED9Q6R2W3 1325 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 EPOPA6NHQ4 379 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 PI4K2BG5E9Z4 385 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 ADD2P35612 726 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 SLC4A3P48751 1232 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 TTLL4Q14679 1199 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 TLK2Q86UE8 772 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 FAM133AQ8N9E0 248 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 SCLYQ96I15 445 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 DNAJC2Q99543 621 aaKnown RBP12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 AP5M1Q9H0R1 490 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 EXOC6BQ9Y2D4 811 aa12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 CTDP1Q9Y5B0 961 aaPredicted RBP12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 COL11A1P12107 1806 aaPredicted RBP12.16□□□□□ -0.46
SMCO4P1-201ENST00000592909 ASB14A6NK59 587 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 DYNC1LI2O43237 492 aaPredicted RBP12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 SLFNL1Q499Z3 407 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 HSP90AB4PQ58FF6 505 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 IQSEC1Q6DN90 963 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 CEP85Q6P2H3 762 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 RHPN1Q8TCX5 695 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 KIFC2Q96AC6 838 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 SLC9A7Q96T83 725 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 ALDH8A1Q9H2A2 487 aaPredicted RBP12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 CERS4Q9HA82 394 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 IL1RAPL2Q9NP60 686 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 FEM1BQ9UK73 627 aa12.15□□□□□ -0.46
SMCO4P1-201ENST00000592909 SOWAHBA6NEL2 793 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 FDX1P10109 184 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 SMPD1P17405 629 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 RASA1P20936 1047 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 PSMC6P62333 389 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 TAP1Q03518 808 aa12.14□□□□□ -0.47
SMCO4P1-201ENST00000592909 UBE3CQ15386 1083 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms