RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MAGEF1Q9HAY2 307 aa18.69■□□□□ 0.58
PRKCSH-217ENST00000592741 ATP6V0A2Q9Y487 856 aa18.69■□□□□ 0.58
PRKCSH-217ENST00000592741 CCNT1O60563 726 aaKnown RBP18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 PICALMQ13492 652 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 KRT31Q15323 416 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 LETM2Q2VYF4 491 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 NEK8Q86SG6 692 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 PIGSQ96S52 555 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 CUEDC2Q9H467 287 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 VAT1LQ9HCJ6 419 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.68■□□□□ 0.582e-6■□□□□ 11.3
PRKCSH-217ENST00000592741 GDAQ9Y2T3 454 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 V9GYY5 206 aaPredicted RBP18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 ESYT2A0FGR8 921 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 USP17L5A8MUK1 530 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 COBLO75128 1261 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 CCT6AP40227 531 aaKnown RBP18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 PRCPP42785 496 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 ORC2Q13416 577 aaPredicted RBP18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 ELF2Q15723 593 aa18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 ZNF397Q8NF99 534 aaPredicted RBP18.68■□□□□ 0.58
PRKCSH-217ENST00000592741 QSER1Q2KHR3 1735 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 N4BP3O15049 544 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 MFAP3LO75121 409 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 TRIM37O94972 964 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 COPB1P53618 953 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 ASPRV1Q53RT3 343 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 CABP7Q86V35 215 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 CNGA4Q8IV77 575 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 CCDC51Q96ER9 411 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 SRRTQ9BXP5 876 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 RIOX1Q9H6W3 641 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 KBTBD4Q9NVX7 518 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 LRRC10BA6NIK2 292 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 KCNJ18B7U540 433 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 PDHBP11177 359 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 GABPAQ06546 454 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 STIM1Q13586 685 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 KCNJ12Q14500 433 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 KMT5BQ4FZB7 885 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 TCP11X2Q5H9J9 407 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 ADSSL1Q8N142 457 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 REXO1Q8N1G1 1221 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 FEZ1Q99689 392 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 ZC3H12CQ9C0D7 883 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 QTRT2Q9H974 415 aaKnown RBP18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 MTMR4Q9NYA4 1195 aa18.67■□□□□ 0.58
PRKCSH-217ENST00000592741 ANKRD31Q8N7Z5 1873 aa18.66■□□□□ 0.58
PRKCSH-217ENST00000592741 F8W031 263 aaPredicted RBP18.66■□□□□ 0.58
PRKCSH-217ENST00000592741 H7C1D1 291 aa18.66■□□□□ 0.58
PRKCSH-217ENST00000592741 CCDC175P0C221 793 aa18.66■□□□□ 0.58
PRKCSH-217ENST00000592741 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
PRKCSH-217ENST00000592741 UBA5Q9GZZ9 404 aa18.66■□□□□ 0.58
PRKCSH-217ENST00000592741 FRMPD2Q68DX3 1309 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 MYH8P13535 1937 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 URI1O94763 535 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 CASQ1P31415 396 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 TRIM14Q14142 442 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 KRT27Q7Z3Y8 459 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 CCDC47Q96A33 483 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 PLIN2Q99541 437 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 TAB2Q9NYJ8 693 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 SWAP70Q9UH65 585 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 MAPK8IP1Q9UQF2 711 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 SOWAHDA6NJG2 315 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 KLRC4O43908 158 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 RHOBTB3O94955 611 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 AKR1B1P15121 316 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 PLCG1P19174 1290 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 CASP14P31944 242 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 HSPA1LP34931 641 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 GNG11P61952 73 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 DPP8Q6V1X1 898 aaPredicted RBP18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 DESI2Q9BSY9 194 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 VPS16Q9H269 839 aa18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 TTF2Q9UNY4 1162 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-217ENST00000592741 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 GYPCP04921 128 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 JAKMIP3Q5VZ66 844 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 LRRC47Q8N1G4 583 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 MYO3BQ8WXR4 1341 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 PSMA7O14818 248 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 NPR1P16066 1061 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 CREBRFQ8IUR6 639 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 CERS5Q8N5B7 392 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 MNS1Q8NEH6 495 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 DDX4Q9NQI0 724 aaKnown RBP18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 USP40Q9NVE5 1235 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 SERPINB13Q9UIV8 391 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.57
PRKCSH-217ENST00000592741 C10orf71Q711Q0 1435 aa18.63■□□□□ 0.57
PRKCSH-217ENST00000592741 FANCGO15287 622 aa18.63■□□□□ 0.57
PRKCSH-217ENST00000592741 TTLL1O95922 423 aa18.63■□□□□ 0.57
PRKCSH-217ENST00000592741 SNHG28P0DPA3 235 aa18.63■□□□□ 0.57
PRKCSH-217ENST00000592741 SRGNP10124 158 aa18.63■□□□□ 0.57
PRKCSH-217ENST00000592741 ADCY7P51828 1080 aa18.63■□□□□ 0.57
PRKCSH-217ENST00000592741 MTF1Q14872 753 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms