RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 NYAP2Q9P242 653 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 CHD9Q3L8U1 2897 aa23.51■■□□□ 1.35
PRKCSH-216ENST00000592445 ATP2A1O14983 1001 aa23.5■■□□□ 1.35
PRKCSH-216ENST00000592445 RAB11FIP3O75154 756 aa23.5■■□□□ 1.35
PRKCSH-216ENST00000592445 CYP2C18P33260 490 aa23.5■■□□□ 1.35
PRKCSH-216ENST00000592445 MRPS5P82675 430 aaKnown RBP23.5■■□□□ 1.35
PRKCSH-216ENST00000592445 RPAP2Q8IXW5 612 aaPredicted RBP23.5■■□□□ 1.35
PRKCSH-216ENST00000592445 RAVER2Q9HCJ3 691 aaKnown RBP23.5■■□□□ 1.35
PRKCSH-216ENST00000592445 NOL8Q76FK4 1167 aaKnown RBP23.49■■□□□ 1.35
PRKCSH-216ENST00000592445 ARMCX2Q7L311 632 aa23.49■■□□□ 1.35
PRKCSH-216ENST00000592445 PUS7LQ9H0K6 701 aaKnown RBP23.49■■□□□ 1.35
PRKCSH-216ENST00000592445 IL23AQ9NPF7 189 aa23.49■■□□□ 1.35
PRKCSH-216ENST00000592445 CLIP2Q9UDT6 1046 aa23.49■■□□□ 1.35
PRKCSH-216ENST00000592445 FBXO40Q9UH90 709 aa23.49■■□□□ 1.35
PRKCSH-216ENST00000592445 RASA1P20936 1047 aa23.48■■□□□ 1.35
PRKCSH-216ENST00000592445 ADGRE1Q14246 886 aa23.48■■□□□ 1.35
PRKCSH-216ENST00000592445 HERVK_113Q902F9 699 aa23.48■■□□□ 1.35
PRKCSH-216ENST00000592445 SLC28A3Q9HAS3 691 aa23.48■■□□□ 1.35
PRKCSH-216ENST00000592445 SLC38A10Q9HBR0 1119 aa23.48■■□□□ 1.35
PRKCSH-216ENST00000592445 MINDY4BA8MYZ0 360 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 FGBP02675 491 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 CCDC144CPQ8IYA2 1237 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 CHST13Q8NET6 341 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 FGD4Q96M96 766 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 UHRF1Q96T88 793 aaPredicted RBP23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 NKX2-4Q9H2Z4 354 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 HOMER2Q9NSB8 354 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 CXXC1Q9P0U4 656 aaPredicted RBP23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 RAPGEFL1Q9UHV5 662 aa23.47■■□□□ 1.35
PRKCSH-216ENST00000592445 CD4P01730 458 aa23.46■■□□□ 1.35
PRKCSH-216ENST00000592445 BEX3Q00994 111 aa23.46■■□□□ 1.35
PRKCSH-216ENST00000592445 SBK1Q52WX2 424 aa23.46■■□□□ 1.35
PRKCSH-216ENST00000592445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.46■■□□□ 1.35
PRKCSH-216ENST00000592445 HIPK3Q9H422 1215 aa23.46■■□□□ 1.35
PRKCSH-216ENST00000592445 FEM1BQ9UK73 627 aa23.46■■□□□ 1.35
PRKCSH-216ENST00000592445 OAZ1P54368 228 aa23.45■■□□□ 1.34
PRKCSH-216ENST00000592445 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
PRKCSH-216ENST00000592445 TNFAIP2Q03169 654 aa23.45■■□□□ 1.34
PRKCSH-216ENST00000592445 SIRT2Q8IXJ6 389 aa23.45■■□□□ 1.34
PRKCSH-216ENST00000592445 STRBPQ96SI9 672 aaKnown RBP23.45■■□□□ 1.34
PRKCSH-216ENST00000592445 TSPYL2Q9H2G4 693 aaPredicted RBP23.45■■□□□ 1.34
PRKCSH-216ENST00000592445 MYO9BQ13459 2157 aa23.44■■□□□ 1.34
PRKCSH-216ENST00000592445 CTAGE5O15320 804 aa23.44■■□□□ 1.34
PRKCSH-216ENST00000592445 CXCL17Q6UXB2 119 aa23.44■■□□□ 1.34
PRKCSH-216ENST00000592445 OTOP2Q7RTS6 562 aa23.44■■□□□ 1.34
PRKCSH-216ENST00000592445 ZNF444Q8N0Y2 327 aaPredicted RBP23.44■■□□□ 1.34
PRKCSH-216ENST00000592445 KATNBL1Q9H079 304 aa23.44■■□□□ 1.34
PRKCSH-216ENST00000592445 ISY1Q9ULR0 285 aaKnown RBP23.44■■□□□ 1.34
PRKCSH-216ENST00000592445 GREB1LQ9C091 1923 aaPredicted RBP23.43■■□□□ 1.34
PRKCSH-216ENST00000592445 CABYRO75952 493 aa23.43■■□□□ 1.34
PRKCSH-216ENST00000592445 MS4A1P11836 297 aa23.43■■□□□ 1.34
PRKCSH-216ENST00000592445 CNTN2Q02246 1040 aa23.43■■□□□ 1.34
PRKCSH-216ENST00000592445 GIMAP6Q6P9H5 292 aa23.43■■□□□ 1.34
PRKCSH-216ENST00000592445 YBX2Q9Y2T7 364 aaKnown RBP23.43■■□□□ 1.34
PRKCSH-216ENST00000592445 MCM3APO60318 1980 aa23.43■■□□□ 1.34
PRKCSH-216ENST00000592445 UMODL1Q5DID0 1318 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 GSG1L2A8MUP6 293 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 CCL23P55773 120 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 NKX3-2P78367 333 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 ITGA7Q13683 1181 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 FSCN1Q16658 493 aaKnown RBP23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 TLK2Q86UE8 772 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 LRRC47Q8N1G4 583 aaKnown RBP23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 MICALL1Q8N3F8 863 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 AP5M1Q9H0R1 490 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 ACAD9Q9H845 621 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 ZNF287Q9HBT7 754 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 CHD7Q9P2D1 2997 aa23.42■■□□□ 1.34
PRKCSH-216ENST00000592445 MYH7P12883 1935 aa23.41■■□□□ 1.34
PRKCSH-216ENST00000592445 IGKV6D-41A0A0C4DH26 115 aa23.41■■□□□ 1.34
PRKCSH-216ENST00000592445 ZEB2O60315 1214 aa23.41■■□□□ 1.34
PRKCSH-216ENST00000592445 PRDM1O75626 825 aa23.41■■□□□ 1.34
PRKCSH-216ENST00000592445 SLC43A3Q8NBI5 491 aa23.41■■□□□ 1.34
PRKCSH-216ENST00000592445 MKL1Q969V6 931 aa23.41■■□□□ 1.34
PRKCSH-216ENST00000592445 CEP95Q96GE4 821 aa23.41■■□□□ 1.34
PRKCSH-216ENST00000592445 ASTN1O14525 1302 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 ASB14A6NK59 587 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 TTLL1O95922 423 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 BMP3P12645 472 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 RABGGTBP53611 331 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 PPP2R2DQ66LE6 453 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 SLFN13Q68D06 897 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 FAM133AQ8N9E0 248 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 GMCL1P1Q8NEA9 526 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 TRPV6Q9H1D0 765 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 ZBTB40Q9NUA8 1239 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 MTMR4Q9NYA4 1195 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 DDX19BQ9UMR2 479 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 SLC4A7Q9Y6M7 1214 aa23.4■■□□□ 1.34
PRKCSH-216ENST00000592445 BDP1A6H8Y1 2624 aa23.39■■□□□ 1.34
PRKCSH-216ENST00000592445 DYNC1LI2O43237 492 aaPredicted RBP23.39■■□□□ 1.33
PRKCSH-216ENST00000592445 FDX1P10109 184 aa23.39■■□□□ 1.33
PRKCSH-216ENST00000592445 TDO2P48775 406 aa23.39■■□□□ 1.33
PRKCSH-216ENST00000592445 RPUSD2Q8IZ73 545 aaKnown RBP23.39■■□□□ 1.33
PRKCSH-216ENST00000592445 NOC4LQ9BVI4 516 aaKnown RBP23.39■■□□□ 1.33
PRKCSH-216ENST00000592445 SEZ6LQ9BYH1 1024 aa23.39■■□□□ 1.33
PRKCSH-216ENST00000592445 A1CFQ9NQ94 594 aaKnown RBP23.39■■□□□ 1.33
PRKCSH-216ENST00000592445 RNF146Q9NTX7 359 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms