RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DNAJC25-GNG10A0A024R161 153 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 TAL1P17542 331 aaPredicted RBP16.35■□□□□ 0.21
CLIP3-205ENST00000592017 NT5C2P49902 561 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 FXR1P51114 621 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLIP3-205ENST00000592017 LRRC26Q2I0M4 334 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
CLIP3-205ENST00000592017 FAM160B2Q86V87 743 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 CHURC1Q8WUH1 139 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 DCAF4Q8WV16 495 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 MAP4K1Q92918 833 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 ZSCAN10Q96SZ4 725 aaPredicted RBP16.35■□□□□ 0.21
CLIP3-205ENST00000592017 LSG1Q9H089 658 aaKnown RBP16.35■□□□□ 0.21
CLIP3-205ENST00000592017 ZSWIM5Q9P217 1185 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 ZMYND8Q9ULU4 1186 aaPredicted RBP16.35■□□□□ 0.21
CLIP3-205ENST00000592017 TAF6LQ9Y6J9 622 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 TNKSO95271 1327 aa16.35■□□□□ 0.21
CLIP3-205ENST00000592017 ZNF236Q9UL36 1845 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 PLA2G6O60733 806 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 OAZ1P54368 228 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 SNAP25P60880 206 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 CCDC178Q5BJE1 867 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 GJC2Q5T442 439 aaPredicted RBP16.34■□□□□ 0.21
CLIP3-205ENST00000592017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.34■□□□□ 0.21
CLIP3-205ENST00000592017 DDX11Q96FC9 970 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 TTC14Q96N46 770 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 KAT14Q9H8E8 782 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 GPCPD1Q9NPB8 672 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 PCDH10Q9P2E7 1040 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 ZNF536O15090 1300 aa16.34■□□□□ 0.21
CLIP3-205ENST00000592017 E7EWF7 191 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 DNM1LO00429 736 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 ZNF865P0CJ78 1059 aaPredicted RBP16.33■□□□□ 0.2
CLIP3-205ENST00000592017 FDX1P10109 184 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 PDHBP11177 359 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 SLC16A2P36021 539 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 TTBK2Q6IQ55 1244 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 CCDC174Q6PII3 467 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 DGKHQ86XP1 1220 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 ENAHQ8N8S7 591 aaPredicted RBP16.33■□□□□ 0.2
CLIP3-205ENST00000592017 FGD4Q96M96 766 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
CLIP3-205ENST00000592017 NRBP1Q9UHY1 535 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 PARP14Q460N5 1801 aa16.33■□□□□ 0.2
CLIP3-205ENST00000592017 SNAI1O95863 264 aaPredicted RBP16.32■□□□□ 0.2
CLIP3-205ENST00000592017 SYN1P17600 705 aa16.32■□□□□ 0.2
CLIP3-205ENST00000592017 IFIT1BQ5T764 474 aaKnown RBP16.32■□□□□ 0.2
CLIP3-205ENST00000592017 STOX1Q6ZVD7 989 aa16.32■□□□□ 0.2
CLIP3-205ENST00000592017 ARRDC4Q8NCT1 418 aa16.32■□□□□ 0.2
CLIP3-205ENST00000592017 PNMA1Q8ND90 353 aa16.32■□□□□ 0.2
CLIP3-205ENST00000592017 CHST13Q8NET6 341 aa16.32■□□□□ 0.2
CLIP3-205ENST00000592017 NCOA7Q8NI08 942 aa16.32■□□□□ 0.2
CLIP3-205ENST00000592017 HOMER2Q9NSB8 354 aa16.32■□□□□ 0.2
CLIP3-205ENST00000592017 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
CLIP3-205ENST00000592017 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
CLIP3-205ENST00000592017 ZNF543Q08ER8 600 aa16.31■□□□□ 0.2
CLIP3-205ENST00000592017 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
CLIP3-205ENST00000592017 MAMDC4Q6UXC1 1216 aa16.31■□□□□ 0.2
CLIP3-205ENST00000592017 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
CLIP3-205ENST00000592017 ANKRD35Q8N283 1001 aa16.31■□□□□ 0.2
CLIP3-205ENST00000592017 FBXO40Q9UH90 709 aa16.31■□□□□ 0.2
CLIP3-205ENST00000592017 ERICH2A1L162 156 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 IFIT3O14879 490 aaKnown RBP16.3■□□□□ 0.2
CLIP3-205ENST00000592017 SLC27A2O14975 620 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
CLIP3-205ENST00000592017 CNTN2Q02246 1040 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 LRRC41Q15345 812 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 CREB3L3Q68CJ9 461 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 BTNL9Q6UXG8 535 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 ZNF467Q7Z7K2 595 aaPredicted RBP16.3■□□□□ 0.2
CLIP3-205ENST00000592017 MSL3Q8N5Y2 521 aaKnown RBP16.3■□□□□ 0.2
CLIP3-205ENST00000592017 LENG1Q96BZ8 264 aaPredicted RBP16.3■□□□□ 0.2
CLIP3-205ENST00000592017 GDF15Q99988 308 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 RNF146Q9NTX7 359 aa16.3■□□□□ 0.2
CLIP3-205ENST00000592017 COL11A1P12107 1806 aaPredicted RBP16.29■□□□□ 0.2
CLIP3-205ENST00000592017 SYNGAP1Q96PV0 1343 aa16.29■□□□□ 0.2
CLIP3-205ENST00000592017 DNAH12Q6ZR08 3092 aa16.29■□□□□ 0.2
CLIP3-205ENST00000592017 SART3Q15020 963 aaKnown RBP16.29■□□□□ 0.2
CLIP3-205ENST00000592017 ANKS1AQ92625 1134 aa16.29■□□□□ 0.2
CLIP3-205ENST00000592017 TRERF1Q96PN7 1200 aa16.29■□□□□ 0.2
CLIP3-205ENST00000592017 ACAD9Q9H845 621 aa16.29■□□□□ 0.2
CLIP3-205ENST00000592017 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
CLIP3-205ENST00000592017 XPNPEP3Q9NQH7 507 aa16.29■□□□□ 0.2
CLIP3-205ENST00000592017 CNPY2Q9Y2B0 182 aa16.29■□□□□ 0.2
CLIP3-205ENST00000592017 SOWAHBA6NEL2 793 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 PGK1P00558 417 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 SNHG28P0DPA3 235 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 RARBP10826 455 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 ALAS1P13196 640 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 ADCYAP1R1P41586 468 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
CLIP3-205ENST00000592017 SEC23AQ15436 765 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 TKFCQ3LXA3 575 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 MUM1L1Q5H9M0 696 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 GPATCH4Q5T3I0 446 aaKnown RBP16.28■□□□□ 0.2
CLIP3-205ENST00000592017 MB21D2Q8IYB1 491 aaPredicted RBP16.28■□□□□ 0.2
CLIP3-205ENST00000592017 FAM133AQ8N9E0 248 aa16.28■□□□□ 0.2
CLIP3-205ENST00000592017 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms