RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 SRRM3A6NNA2 597 aaPredicted RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 GOLIM4O00461 696 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 EBAG9O00559 213 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 CHUKO15111 745 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 POLR3GO15318 223 aaPredicted RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 ARHGAP6O43182 974 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 KINO60870 393 aaKnown RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 GNAI3P08754 354 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 ZKSCAN1P17029 563 aaPredicted RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 CHMLP26374 656 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 MNAT1P51948 309 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 EVCP57679 992 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 LMNB2Q03252 620 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 APOBRQ0VD83 1088 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 LRMPQ12912 555 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 DRP2Q13474 957 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 CRYMQ14894 314 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 TWISTNBQ3B726 338 aaPredicted RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 CT47A1Q5JQC4 288 aaPredicted RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 BRAPQ7Z569 592 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 KIAA1328Q86T90 577 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 LUZP1Q86V48 1076 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 GPATCH11Q8N954 259 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 RPGRIP1Q96KN7 1286 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 TTC14Q96N46 770 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 LRRCC1Q9C099 1032 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 SMG9Q9H0W8 520 aaKnown RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 TMX4Q9H1E5 349 aaPredicted RBP6.75□□□□□ -1.33
NPC1-213ENST00000591955 CYP46A1Q9Y6A2 500 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 KIF1BO60333 1816 aa6.75□□□□□ -1.33
NPC1-213ENST00000591955 SBNO1A3KN83 1393 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 NWD2Q9ULI1 1742 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 PATL2C9JE40 543 aaKnown RBP6.74□□□□□ -1.33
NPC1-213ENST00000591955 IKBKBO14920 756 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 AP5Z1O43299 807 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 INPP5BP32019 993 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 NF2P35240 595 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 MLLT1Q03111 559 aaPredicted RBP6.74□□□□□ -1.33
NPC1-213ENST00000591955 IQCB1Q15051 598 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 RTN1Q16799 776 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 LONRF2Q1L5Z9 754 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 C11orf91Q3C1V1 193 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 RSRC2Q7L4I2 434 aaKnown RBP6.74□□□□□ -1.33
NPC1-213ENST00000591955 YTHDF3Q7Z739 585 aaKnown RBP6.74□□□□□ -1.33
NPC1-213ENST00000591955 TICAM2Q86XR7 235 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 ZDHHC13Q8IUH4 622 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 CCAR1Q8IX12 1150 aaKnown RBP6.74□□□□□ -1.33
NPC1-213ENST00000591955 CNTROBQ8N137 903 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 LARGE2Q8N3Y3 721 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 MAGEC3Q8TD91 643 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 KCNB2Q92953 911 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 IFT43Q96FT9 208 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 CABS1Q96KC9 395 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 FUT8Q9BYC5 575 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 BATF3Q9NR55 127 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 GNL3LQ9NVN8 582 aaKnown RBP6.74□□□□□ -1.33
NPC1-213ENST00000591955 DACT1Q9NYF0 836 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 MYO1AQ9UBC5 1043 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 GGA2Q9UJY4 613 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 RAB21Q9UL25 225 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
NPC1-213ENST00000591955 PXDNLA1KZ92 1463 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 ARID1BQ8NFD5 2236 aaPredicted RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 MAP3K5Q99683 1374 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 KLHL33A6NCF5 533 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 PALM3A6NDB9 673 aaPredicted RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 TTC36A6NLP5 189 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 H0YHG0 523 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 SMARCA5O60264 1052 aaPredicted RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 ZEB2O60315 1214 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 KIAA0754O94854 1291 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 DKK1O94907 266 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 EPB42P16452 691 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 GJB2P29033 226 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 AARSP49588 968 aaKnown RBP eCLIP6.73□□□□□ -1.33
NPC1-213ENST00000591955 DNM1Q05193 864 aaKnown RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 PPP2R3AQ06190 1150 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 IFFO1Q0D2I5 559 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 DCTN1Q14203 1278 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 KRT32Q14532 448 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 NBPF6Q5VWK0 638 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 NBPF5PQ86XG9 351 aaPredicted RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 APLFQ8IW19 511 aaPredicted RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 REXO1L1PQ8IX06 675 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 AMOTL1Q8IY63 956 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 TEX11Q8IYF3 940 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 SIX5Q8N196 739 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 MSANTD4Q8NCY6 345 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 TCP11Q8WWU5 503 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 FOXD4L4Q8WXT5 416 aaPredicted RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 P3H4Q92791 437 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 GPATCH3Q96I76 525 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 NBPF4Q96M43 638 aa6.73□□□□□ -1.33
NPC1-213ENST00000591955 ZNF396Q96N95 335 aaPredicted RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 PAIP2Q9BPZ3 127 aaKnown RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 THUMPD2Q9BTF0 503 aaKnown RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 NAA15Q9BXJ9 866 aaKnown RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 UPF3BQ9BZI7 483 aaKnown RBP6.73□□□□□ -1.33
NPC1-213ENST00000591955 VEZTQ9HBM0 779 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms