RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 KARSQ15046 597 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 Q4G0T1 1027 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 CTAGE6Q86UF2 777 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 CTAGE4Q8IX94 777 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 ZFATQ9P243 1243 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 AGPSO00116 658 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 PDLIM1O00151 329 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 MGRN1O60291 552 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 ANP32DO95626 131 aa13.58□□□□□ -0.24
SMARCA4-217ENST00000591595 FOXP2O15409 715 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 ATP6V1G2O95670 118 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 SAFBQ15424 915 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 TMEM67Q5HYA8 995 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 SHC4Q6S5L8 630 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 GDAP1L1Q96MZ0 367 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 PCDHA5Q9Y5H7 936 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 TMEM232C9JQI7 657 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 GET4Q7L5D6 327 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 UBE2OQ9C0C9 1292 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 ZNF510Q9Y2H8 683 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 SPTY2D1Q68D10 685 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 APOA5Q6Q788 366 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 AATFQ9NY61 560 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMARCA4-217ENST00000591595 FER1L4A9Z1Z3 1794 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 E2F6O75461 281 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 LONRF3Q496Y0 759 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 NUGGCQ68CJ6 796 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 KIF6Q6ZMV9 814 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 CYB5R4Q7L1T6 521 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 TBC1D10CQ8IV04 446 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 ZNF473Q8WTR7 871 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 IFIT3O14879 490 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 CDC27P30260 824 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 AKAP17AQ02040 695 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 TMEM110Q86TL2 294 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 TMEM98Q9Y2Y6 226 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 SLIT3O75094 1523 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 NEDD4P46934 1319 aa13.56□□□□□ -0.24
SMARCA4-217ENST00000591595 GALNT17Q6IS24 598 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 TEKT4Q8WW24 435 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 FAM81BQ96LP2 452 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 INCENPQ9NQS7 918 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 C5P01031 1676 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 UBE2Q2LH0YL09 131 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 SMAPO00193 183 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 UPP2O95045 317 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 MCAMP43121 646 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 SKOR1P84550 965 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 TCIRG1Q13488 830 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 TUBB2AQ13885 445 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 TOGARAM2Q6ZUX3 1019 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 NOA1Q8NC60 698 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 TUBB2BQ9BVA1 445 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 GGA2Q9UJY4 613 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 FOXN1O15353 648 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 PPP6R2O75170 966 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 RPL13P26373 211 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 ZNF827Q17R98 1081 aa13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 TRMT44Q8IYL2 757 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-217ENST00000591595 TFRCP02786 760 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 DESP17661 470 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 XRCC4Q13426 336 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 CRELD2Q6UXH1 353 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 ELOA2Q8IYF1 753 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 RUFY1Q96T51 708 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 OSBPL1AQ9BXW6 950 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 NAPBQ9H115 298 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 EPN3Q9H201 632 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 PIDD1Q9HB75 910 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 UTP6Q9NYH9 597 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 ZNF532Q9HCE3 1301 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 GOLGA8KD6RF30 607 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 SH2B2O14492 632 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 LUC7L3O95232 432 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 PARP1P09874 1014 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 ADKP55263 362 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 PIP4K2BP78356 416 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 METTL16Q86W50 562 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 VSTM4Q8IW00 320 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 KRI1Q8N9T8 703 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 CCDC148Q8NFR7 591 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 NFE2L3Q9Y4A8 694 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 DNM1LO00429 736 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 MBD4O95243 580 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 ITGA6P23229 1130 aa13.54□□□□□ -0.24
SMARCA4-217ENST00000591595 MCM3P25205 808 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms