RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 RNF180Q86T96 592 aa21.19■□□□□ 0.98
VAT1-208ENST00000590924 CHST13Q8NET6 341 aa21.19■□□□□ 0.98
VAT1-208ENST00000590924 GMCL1Q96IK5 515 aa21.19■□□□□ 0.98
VAT1-208ENST00000590924 FBXO40Q9UH90 709 aa21.19■□□□□ 0.98
VAT1-208ENST00000590924 LAMA4Q16363 1823 aa21.19■□□□□ 0.98
VAT1-208ENST00000590924 SGSM2O43147 1006 aa21.18■□□□□ 0.98
VAT1-208ENST00000590924 PGK1P00558 417 aa21.18■□□□□ 0.98
VAT1-208ENST00000590924 ZNF589Q86UQ0 364 aaPredicted RBP21.18■□□□□ 0.98
VAT1-208ENST00000590924 FERMT2Q96AC1 680 aa21.18■□□□□ 0.98
VAT1-208ENST00000590924 ANAPC4Q9UJX5 808 aa21.18■□□□□ 0.98
VAT1-208ENST00000590924 LAMA2P24043 3122 aaKnown RBP21.17■□□□□ 0.98
VAT1-208ENST00000590924 ADAMTS4O75173 837 aa21.17■□□□□ 0.98
VAT1-208ENST00000590924 SNAI1O95863 264 aaPredicted RBP21.17■□□□□ 0.98
VAT1-208ENST00000590924 HSPD1P10809 573 aaKnown RBP21.17■□□□□ 0.98
VAT1-208ENST00000590924 SLC4A3P48751 1232 aa21.17■□□□□ 0.98
VAT1-208ENST00000590924 FAM160B2Q86V87 743 aa21.17■□□□□ 0.98
VAT1-208ENST00000590924 DEFB123Q8N688 67 aa21.17■□□□□ 0.98
VAT1-208ENST00000590924 DSCC1Q9BVC3 393 aa21.17■□□□□ 0.98
VAT1-208ENST00000590924 PDLIM7Q9NR12 457 aa21.17■□□□□ 0.98
VAT1-208ENST00000590924 ZMYM6O95789 1325 aa21.17■□□□□ 0.98
VAT1-208ENST00000590924 TSPY2A6NKD2 308 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 TMEM232C9JQI7 657 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 SLC1A4P43007 532 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 CTDSPL2Q05D32 466 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 VPS53Q5VIR6 699 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 ANKRD35Q8N283 1001 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 CHURC1Q8WUH1 139 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 LENG1Q96BZ8 264 aaPredicted RBP21.16■□□□□ 0.98
VAT1-208ENST00000590924 FGD4Q96M96 766 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 PRDM5Q9NQX1 630 aaPredicted RBP21.16■□□□□ 0.98
VAT1-208ENST00000590924 FAM184BQ9ULE4 1060 aa21.16■□□□□ 0.98
VAT1-208ENST00000590924 SYNRGQ9UMZ2 1314 aa21.15■□□□□ 0.98
VAT1-208ENST00000590924 PLA2G6O60733 806 aa21.15■□□□□ 0.98
VAT1-208ENST00000590924 Q7L0L9 218 aa21.15■□□□□ 0.98
VAT1-208ENST00000590924 STAG1Q8WVM7 1258 aa21.15■□□□□ 0.98
VAT1-208ENST00000590924 ESYT1Q9BSJ8 1104 aa21.15■□□□□ 0.98
VAT1-208ENST00000590924 TSEN34Q9BSV6 310 aaKnown RBP21.15■□□□□ 0.98
VAT1-208ENST00000590924 IL17RBQ9NRM6 502 aa21.15■□□□□ 0.98
VAT1-208ENST00000590924 ISY1Q9ULR0 285 aaKnown RBP21.15■□□□□ 0.98
VAT1-208ENST00000590924 STX8Q9UNK0 236 aa21.15■□□□□ 0.98
VAT1-208ENST00000590924 A0A1W2PQ45 241 aaPredicted RBP21.14■□□□□ 0.97
VAT1-208ENST00000590924 A0A1W2PQY0 241 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 ORC4O43929 436 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 FGAP02671 866 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 FGRP09769 529 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 NOVP48745 357 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 ABHD16BQ9H3Z7 469 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 ACAD9Q9H845 621 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.14■□□□□ 0.97
VAT1-208ENST00000590924 ZHX1Q9UKY1 873 aaPredicted RBP21.14■□□□□ 0.97
VAT1-208ENST00000590924 MYH6P13533 1939 aa21.14■□□□□ 0.97
VAT1-208ENST00000590924 ZNF536O15090 1300 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 NMT2O60551 498 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 DUSP11O75319 330 aaKnown RBP21.13■□□□□ 0.97
VAT1-208ENST00000590924 MCCP23508 829 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 TLE2Q04725 743 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 IKQ13123 557 aaPredicted RBP21.13■□□□□ 0.97
VAT1-208ENST00000590924 ACVR2BQ13705 512 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 KIAA1211Q6ZU35 1233 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 KLHDC9Q8NEP7 349 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 IL25Q9H293 177 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 INCENPQ9NQS7 918 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 HOMER2Q9NSB8 354 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 MTMR10Q9NXD2 777 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 CTNNA3Q9UI47 895 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 TACC3Q9Y6A5 838 aa21.13■□□□□ 0.97
VAT1-208ENST00000590924 TRIM43BA6NCK2 446 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 MOXD2PA6NHM9 499 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 RANBP6O60518 1105 aaKnown RBP21.12■□□□□ 0.97
VAT1-208ENST00000590924 CST5P28325 142 aaPredicted RBP21.12■□□□□ 0.97
VAT1-208ENST00000590924 ACLYP53396 1101 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 TKFCQ3LXA3 575 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 RCSD1Q6JBY9 416 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 ARMCX2Q7L311 632 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 SH3RF1Q7Z6J0 888 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 FAM133AQ8N9E0 248 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 TRIM43Q96BQ3 446 aaPredicted RBP21.12■□□□□ 0.97
VAT1-208ENST00000590924 RNF146Q9NTX7 359 aa21.12■□□□□ 0.97
VAT1-208ENST00000590924 CLTBP09497 229 aa21.11■□□□□ 0.97
VAT1-208ENST00000590924 CCSAPQ6IQ19 270 aaPredicted RBP21.11■□□□□ 0.97
VAT1-208ENST00000590924 KCTD1Q719H9 257 aa21.11■□□□□ 0.97
VAT1-208ENST00000590924 NUP133Q8WUM0 1156 aa21.11■□□□□ 0.97
VAT1-208ENST00000590924 BADQ92934 168 aa21.11■□□□□ 0.97
VAT1-208ENST00000590924 A1CFQ9NQ94 594 aaKnown RBP21.11■□□□□ 0.97
VAT1-208ENST00000590924 POTEB2H3BUK9 544 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 ADCY6O43306 1168 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 CNTN2Q02246 1040 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 CCDC144BQ3MJ40 725 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 FAM109BQ6ICB4 259 aaPredicted RBP21.1■□□□□ 0.97
VAT1-208ENST00000590924 RASGRP2Q7LDG7 609 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 CCDC144CPQ8IYA2 1237 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 MAP4K1Q92918 833 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 AGBL1Q96MI9 1066 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 KATNBL1Q9H079 304 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 UPF3AQ9H1J1 476 aaKnown RBP21.1■□□□□ 0.97
VAT1-208ENST00000590924 STARD7Q9NQZ5 370 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 PRR12Q9ULL5 1215 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 STXBP5LQ9Y2K9 1186 aa21.1■□□□□ 0.97
VAT1-208ENST00000590924 KIAA0355O15063 1070 aa21.09■□□□□ 0.97
VAT1-208ENST00000590924 EIF5BO60841 1220 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms