RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ITGB8P26012 769 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 SLC1A4P43007 532 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 PPP4R3BQ5MIZ7 849 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 VPS53Q5VIR6 699 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 KLHDC9Q8NEP7 349 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 STAG1Q8WVM7 1258 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 EVI5LQ96CN4 794 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 STARD7Q9NQZ5 370 aa25.81■■□□□ 1.72
DDX39A-215ENST00000590696 LAMA2P24043 3122 aaKnown RBP25.8■■□□□ 1.72
DDX39A-215ENST00000590696 KCNA10Q16322 511 aa25.8■■□□□ 1.72
DDX39A-215ENST00000590696 ARMCX2Q7L311 632 aa25.8■■□□□ 1.72
DDX39A-215ENST00000590696 NUP133Q8WUM0 1156 aa25.8■■□□□ 1.72
DDX39A-215ENST00000590696 AGBL1Q96MI9 1066 aa25.8■■□□□ 1.72
DDX39A-215ENST00000590696 FAM161BQ96MY7 647 aa25.8■■□□□ 1.72
DDX39A-215ENST00000590696 ABHD16BQ9H3Z7 469 aa25.8■■□□□ 1.72
DDX39A-215ENST00000590696 IL17RBQ9NRM6 502 aa25.8■■□□□ 1.72
DDX39A-215ENST00000590696 MYADML2A6NDP7 307 aa25.79■■□□□ 1.72
DDX39A-215ENST00000590696 MOXD2PA6NHM9 499 aa25.79■■□□□ 1.72
DDX39A-215ENST00000590696 NMT2O60551 498 aa25.79■■□□□ 1.72
DDX39A-215ENST00000590696 CCDC144BQ3MJ40 725 aa25.79■■□□□ 1.72
DDX39A-215ENST00000590696 CCSAPQ6IQ19 270 aaPredicted RBP25.79■■□□□ 1.72
DDX39A-215ENST00000590696 KCTD1Q719H9 257 aa25.79■■□□□ 1.72
DDX39A-215ENST00000590696 ACAD9Q9H845 621 aa25.79■■□□□ 1.72
DDX39A-215ENST00000590696 ZNF536O15090 1300 aa25.79■■□□□ 1.72
DDX39A-215ENST00000590696 DLL1O00548 723 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 KIAA0355O15063 1070 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 ADCY6O43306 1168 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 RANBP6O60518 1105 aaKnown RBP25.78■■□□□ 1.72
DDX39A-215ENST00000590696 RAG1P15918 1043 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 PDE1AP54750 535 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 IRX5P78411 483 aaPredicted RBP25.78■■□□□ 1.72
DDX39A-215ENST00000590696 CNTN2Q02246 1040 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 RCSD1Q6JBY9 416 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 CCDC144CPQ8IYA2 1237 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 HELLSQ9NRZ9 838 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 RNF146Q9NTX7 359 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 TMEM39AQ9NV64 488 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 ANAPC4Q9UJX5 808 aa25.78■■□□□ 1.72
DDX39A-215ENST00000590696 PLA2G6O60733 806 aa25.77■■□□□ 1.72
DDX39A-215ENST00000590696 C6orf222P0C671 652 aaPredicted RBP25.77■■□□□ 1.72
DDX39A-215ENST00000590696 ZNF697Q5TEC3 545 aa25.77■■□□□ 1.72
DDX39A-215ENST00000590696 ANKRD33Q7Z3H0 272 aa25.77■■□□□ 1.72
DDX39A-215ENST00000590696 GUCD1Q96NT3 240 aa25.77■■□□□ 1.72
DDX39A-215ENST00000590696 A1CFQ9NQ94 594 aaKnown RBP25.77■■□□□ 1.72
DDX39A-215ENST00000590696 DCDC2CA8MYV0 355 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 CST5P28325 142 aaPredicted RBP25.76■■□□□ 1.71
DDX39A-215ENST00000590696 SNAP25P60880 206 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 FAAP100Q0VG06 881 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 TKFCQ3LXA3 575 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 CCDC174Q6PII3 467 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 RASGRP2Q7LDG7 609 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 FAM133AQ8N9E0 248 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 TOX2Q96NM4 488 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 TRERF1Q96PN7 1200 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 SPC25Q9HBM1 224 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 MTMR7Q9Y216 660 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 MCM3APO60318 1980 aa25.76■■□□□ 1.71
DDX39A-215ENST00000590696 ASGR1P07306 291 aa25.75■■□□□ 1.71
DDX39A-215ENST00000590696 ALAS1P13196 640 aa25.75■■□□□ 1.71
DDX39A-215ENST00000590696 GJA9P57773 515 aa25.75■■□□□ 1.71
DDX39A-215ENST00000590696 HDAC1Q13547 482 aaPredicted RBP25.75■■□□□ 1.71
DDX39A-215ENST00000590696 ALX1Q15699 326 aa25.75■■□□□ 1.71
DDX39A-215ENST00000590696 PCSK9Q8NBP7 692 aaKnown RBP25.75■■□□□ 1.71
DDX39A-215ENST00000590696 GLT1D1Q96MS3 346 aa25.75■■□□□ 1.71
DDX39A-215ENST00000590696 KATNBL1Q9H079 304 aa25.75■■□□□ 1.71
DDX39A-215ENST00000590696 UPF3AQ9H1J1 476 aaKnown RBP25.75■■□□□ 1.71
DDX39A-215ENST00000590696 PRR12Q9ULL5 1215 aa25.75■■□□□ 1.71
DDX39A-215ENST00000590696 SOWAHBA6NEL2 793 aa25.74■■□□□ 1.71
DDX39A-215ENST00000590696 ORC4O43929 436 aa25.74■■□□□ 1.71
DDX39A-215ENST00000590696 EPHB4P54760 987 aa25.74■■□□□ 1.71
DDX39A-215ENST00000590696 FAM227BQ96M60 508 aa25.74■■□□□ 1.71
DDX39A-215ENST00000590696 TOMM22Q9NS69 142 aa25.74■■□□□ 1.71
DDX39A-215ENST00000590696 ELP1O95163 1332 aa25.73■■□□□ 1.71
DDX39A-215ENST00000590696 FGAP02671 866 aa25.73■■□□□ 1.71
DDX39A-215ENST00000590696 FGRP09769 529 aa25.73■■□□□ 1.71
DDX39A-215ENST00000590696 NOVP48745 357 aa25.73■■□□□ 1.71
DDX39A-215ENST00000590696 MCMDC2Q4G0Z9 681 aa25.73■■□□□ 1.71
DDX39A-215ENST00000590696 GNASQ5JWF2 1037 aa25.73■■□□□ 1.71
DDX39A-215ENST00000590696 VTI1AQ96AJ9 217 aa25.73■■□□□ 1.71
DDX39A-215ENST00000590696 A0A0D9SFI3 127 aa25.72■■□□□ 1.71
DDX39A-215ENST00000590696 ASB14A6NK59 587 aa25.72■■□□□ 1.71
DDX39A-215ENST00000590696 SMAD3P84022 425 aaKnown RBP25.72■■□□□ 1.71
DDX39A-215ENST00000590696 FPGSQ05932 587 aa25.72■■□□□ 1.71
DDX39A-215ENST00000590696 MUM1L1Q5H9M0 696 aa25.72■■□□□ 1.71
DDX39A-215ENST00000590696 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.71■■□□□ 1.71
DDX39A-215ENST00000590696 CDK7P50613 346 aa25.71■■□□□ 1.71
DDX39A-215ENST00000590696 TNFAIP2Q03169 654 aa25.71■■□□□ 1.71
DDX39A-215ENST00000590696 CCDC96Q2M329 555 aa25.71■■□□□ 1.71
DDX39A-215ENST00000590696 RRP12Q5JTH9 1297 aaKnown RBP25.71■■□□□ 1.71
DDX39A-215ENST00000590696 DCAF4Q8WV16 495 aa25.71■■□□□ 1.71
DDX39A-215ENST00000590696 RNPC3Q96LT9 517 aaKnown RBP25.71■■□□□ 1.71
DDX39A-215ENST00000590696 MROH7Q68CQ1 1323 aa25.7■■□□□ 1.71
DDX39A-215ENST00000590696 CTAGE5O15320 804 aa25.7■■□□□ 1.7
DDX39A-215ENST00000590696 NOL8Q76FK4 1167 aaKnown RBP25.7■■□□□ 1.7
DDX39A-215ENST00000590696 SEMA6BQ9H3T3 888 aa25.7■■□□□ 1.7
DDX39A-215ENST00000590696 CCPG1Q9ULG6 757 aa25.7■■□□□ 1.7
DDX39A-215ENST00000590696 A0A0U1RQG5 324 aaPredicted RBP25.69■■□□□ 1.7
DDX39A-215ENST00000590696 TRIM6-TRIM34B2RNG4 842 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 TIMP1P01033 207 aa25.69■■□□□ 1.7
DDX39A-215ENST00000590696 HSPD1P10809 573 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms