RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 USP14P54578 494 aa13.9□□□□□ -0.18
PDE4A-207ENST00000590407 MECOMQ03112 1051 aa13.9□□□□□ -0.18
PDE4A-207ENST00000590407 CKAP4Q07065 602 aaKnown RBP13.9□□□□□ -0.18
PDE4A-207ENST00000590407 ITPK1Q13572 414 aa13.9□□□□□ -0.18
PDE4A-207ENST00000590407 CASP8Q14790 479 aa13.9□□□□□ -0.18
PDE4A-207ENST00000590407 ZSCAN26Q16670 478 aa13.9□□□□□ -0.18
PDE4A-207ENST00000590407 CHP1Q99653 195 aa13.9□□□□□ -0.18
PDE4A-207ENST00000590407 TCP11L1Q9NUJ3 509 aa13.9□□□□□ -0.18
PDE4A-207ENST00000590407 A0A1W2PQJ5 194 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 ABL1P00519 1130 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 ORC2Q13416 577 aaPredicted RBP13.89□□□□□ -0.19
PDE4A-207ENST00000590407 MAP9Q49MG5 647 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 WDR59Q6PJI9 974 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 FAM114A1Q8IWE2 563 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 RUBCNQ92622 972 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 PURBQ96QR8 312 aaKnown RBP13.89□□□□□ -0.19
PDE4A-207ENST00000590407 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 MAGEC2Q9UBF1 373 aaPredicted RBP13.89□□□□□ -0.19
PDE4A-207ENST00000590407 FAM205AQ6ZU69 1335 aa13.89□□□□□ -0.19
PDE4A-207ENST00000590407 BICDL2A1A5D9 508 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 EIF3CLB5ME19 914 aaKnown RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 IVLP07476 585 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 CYLC1P35663 651 aaPredicted RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 HSPA2P54652 639 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 HERVK_113P62684 666 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 IRX5P78411 483 aaPredicted RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 MCM6Q14566 821 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 NOA1Q8NC60 698 aaKnown RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 SMARCC1Q92922 1105 aaPredicted RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 EIF3CQ99613 913 aaKnown RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 ANKRD2Q9GZV1 360 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 KAT14Q9H8E8 782 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 SAR1BQ9Y6B6 198 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 CASZ1Q86V15 1759 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 CCDC194A0A1B0GVG4 234 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 TSPY2A6NKD2 308 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 KRT86O43790 486 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 CCNE1P24864 410 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 ZBED6P86452 979 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 RAD51AP2Q09MP3 1159 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 ZSCAN29Q8IWY8 852 aaPredicted RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 ERGIC2Q96RQ1 377 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 MKRN1Q9UHC7 482 aaKnown RBP13.88□□□□□ -0.19
PDE4A-207ENST00000590407 KAT6BQ8WYB5 2073 aa13.88□□□□□ -0.19
PDE4A-207ENST00000590407 CCDC88AQ3V6T2 1871 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 NMT2O60551 498 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 RHOXF2BP0C7M4 288 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 VEGFAP15692 232 aaPredicted RBP13.87□□□□□ -0.19
PDE4A-207ENST00000590407 HNRNPH3P31942 346 aaKnown RBP13.87□□□□□ -0.19
PDE4A-207ENST00000590407 UBA7P41226 1012 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 ITIH3Q06033 890 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 ERFEQ4G0M1 354 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 HSP90B2PQ58FF3 399 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 FAM47AQ5JRC9 791 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 SPTY2D1Q68D10 685 aaPredicted RBP13.87□□□□□ -0.19
PDE4A-207ENST00000590407 AEBP2Q6ZN18 517 aaPredicted RBP13.87□□□□□ -0.19
PDE4A-207ENST00000590407 TRIM47Q96LD4 638 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 DUSP9Q99956 384 aaKnown RBP13.87□□□□□ -0.19
PDE4A-207ENST00000590407 C7orf25Q9BPX7 421 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 RHOXF2Q9BQY4 288 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 TSGA10Q9BZW7 698 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 EXOC1Q9NV70 894 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 ZNHIT6Q9NWK9 470 aaKnown RBP13.87□□□□□ -0.19
PDE4A-207ENST00000590407 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 GUCA1BQ9UMX6 200 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 PCDHA6Q9UN73 950 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 PCDHA8Q9Y5H6 950 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 ABCB11O95342 1321 aa13.87□□□□□ -0.19
PDE4A-207ENST00000590407 ADAMTS3O15072 1205 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 HIBADHP31937 336 aaKnown RBP13.86□□□□□ -0.19
PDE4A-207ENST00000590407 LMAN1P49257 510 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 PMS1P54277 932 aaKnown RBP13.86□□□□□ -0.19
PDE4A-207ENST00000590407 CCDC122Q5T0U0 273 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 C12orf60Q5U649 245 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 FOXR2Q6PJQ5 311 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 C3orf67Q6ZVT6 689 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 ZNF572Q7Z3I7 529 aaPredicted RBP13.86□□□□□ -0.19
PDE4A-207ENST00000590407 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 P2RX5Q93086 422 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 VPS18Q9P253 973 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 FLT1P17948 1338 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 ZNF335Q9H4Z2 1342 aaPredicted RBP13.86□□□□□ -0.19
PDE4A-207ENST00000590407 TRIM49BA6NDI0 452 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 COBLO75128 1261 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 SMARCA1P28370 1054 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 NCAPH2Q6IBW4 605 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 IQCEQ6IPM2 695 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 LEKR1Q6ZMV7 388 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 FNBP4Q8N3X1 1017 aaPredicted RBP13.86□□□□□ -0.19
PDE4A-207ENST00000590407 JAKMIP2Q96AA8 810 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 TUBGCP2Q9BSJ2 902 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 TMEM60Q9H2L4 133 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 IL17RBQ9NRM6 502 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 MAD2L2Q9UI95 211 aa13.86□□□□□ -0.19
PDE4A-207ENST00000590407 IRS2Q9Y4H2 1338 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 RASSF10A6NK89 507 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 STXBP3O00186 592 aa13.85□□□□□ -0.19
PDE4A-207ENST00000590407 IPO7O95373 1038 aaKnown RBP13.85□□□□□ -0.19
PDE4A-207ENST00000590407 CYP2D6P10635 497 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms