RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 HAUS4Q9H6D7 363 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 A8MUI8 341 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 CABP4P57796 275 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 TMC4Q7Z404 712 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 IFNL2Q8IZJ0 200 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 PIK3R5Q8WYR1 880 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 SEC16BQ96JE7 1060 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 STIM2Q9P246 746 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
CIRBP-228ENST00000590347 MAP3K13O43283 966 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 BUB1O43683 1085 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 RANBP6O60518 1105 aaKnown RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 EPHB4P54760 987 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 ELF3P78545 371 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 CUL4BQ13620 913 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 ZNF570Q96NI8 536 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 LRRC4CQ9HCJ2 640 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 MYO1AQ9UBC5 1043 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 LUC7L2Q9Y383 392 aaKnown RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 SNUPNO95149 360 aaKnown RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 C6orf89Q6UWU4 347 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 KDM7AQ6ZMT4 941 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 DIS3L2Q8IYB7 885 aaKnown RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 HAUS7Q99871 368 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 FBXO2Q9UK22 296 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 PLAAQ9Y263 795 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 GDAQ9Y2T3 454 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 MYH10P35580 1976 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 MEGF6O75095 1541 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 KCNJ18B7U540 433 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 PPP1R3GB7ZBB8 358 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 KRT86O43790 486 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 KCNJ12Q14500 433 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 HLTFQ14527 1009 aaKnown RBP eCLIP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 TSR1Q2NL82 804 aaKnown RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 CDKAL1Q5VV42 579 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 CPLX4Q7Z7G2 160 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
CIRBP-228ENST00000590347 CABP5Q9NP86 173 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 PANK4Q9NVE7 773 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
CIRBP-228ENST00000590347 PACSIN2Q9UNF0 486 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-228ENST00000590347 HEXIM1O94992 359 aaKnown RBP16.86■□□□□ 0.29
CIRBP-228ENST00000590347 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
CIRBP-228ENST00000590347 EVA1CP58658 441 aa16.86■□□□□ 0.29
CIRBP-228ENST00000590347 PDIA6Q15084 440 aa16.86■□□□□ 0.29
CIRBP-228ENST00000590347 DDX42Q86XP3 938 aaKnown RBP eCLIP16.86■□□□□ 0.292e-6■■■□□ 17.9
CIRBP-228ENST00000590347 OR8K1Q8NGG5 319 aa16.86■□□□□ 0.29
CIRBP-228ENST00000590347 SPAG5Q96R06 1193 aa16.86■□□□□ 0.29
CIRBP-228ENST00000590347 ZKSCAN3Q9BRR0 538 aa16.86■□□□□ 0.29
CIRBP-228ENST00000590347 BIN2Q9UBW5 565 aaPredicted RBP16.86■□□□□ 0.29
CIRBP-228ENST00000590347 FAM208AQ9UK61 1670 aaKnown RBP16.86■□□□□ 0.29
CIRBP-228ENST00000590347 RBBP5Q15291 538 aaKnown RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 EHBP1Q8NDI1 1231 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 AGAP11Q8TF27 550 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 ZNF594Q96JF6 807 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 PIDD1Q9HB75 910 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 TMCO5BA8MYB1 307 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 B4E1Z4 1266 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 NKRFO15226 690 aaKnown RBP eCLIP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 PTPN12Q05209 780 aaKnown RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 CDCA2Q69YH5 1023 aaPredicted RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 CYB5R4Q7L1T6 521 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 KLHL7Q8IXQ5 586 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 KIF2BQ8N4N8 673 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 CUL5Q93034 780 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 CNOT8Q9UFF9 292 aaKnown RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 STK38LQ9Y2H1 464 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 MYH13Q9UKX3 1938 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 GMNCA6NCL1 334 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 IPO7O95373 1038 aaKnown RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 VAV2P52735 878 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 BYSLQ13895 437 aaKnown RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 IMMTQ16891 758 aaKnown RBP16.85■□□□□ 0.29
CIRBP-228ENST00000590347 TTLL7Q6ZT98 887 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 ATP6V1G3Q96LB4 118 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 ARHGEF10LQ9HCE6 1279 aa16.85■□□□□ 0.29
CIRBP-228ENST00000590347 ERCC5P28715 1186 aaPredicted RBP16.84■□□□□ 0.29
CIRBP-228ENST00000590347 SLC8A1P32418 973 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 CACNA2D3Q8IZS8 1091 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 PAGE5Q96GU1 130 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 PLIN2Q99541 437 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 DSCC1Q9BVC3 393 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 SMIM23A6NLE4 172 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 WNT7AO00755 349 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 TRIM21P19474 475 aaKnown RBP16.84■□□□□ 0.29
CIRBP-228ENST00000590347 SSR1P43307 286 aaKnown RBP16.84■□□□□ 0.29
CIRBP-228ENST00000590347 MAP3K12Q12852 859 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 ZC3H12AQ5D1E8 599 aaKnown RBP16.84■□□□□ 0.29
CIRBP-228ENST00000590347 YTHDF3Q7Z739 585 aaKnown RBP16.84■□□□□ 0.29
CIRBP-228ENST00000590347 NOSTRINQ8IVI9 506 aa16.84■□□□□ 0.29
CIRBP-228ENST00000590347 CTAGE1Q96RT6 745 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms