RNA–Protein interactions for RNA: ENST00000590135.5

U2AF1L4-213, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 2

Gene U2AF1L4, Length 1,763 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-213	ENST00000590135	CDK8	P49336	464 aa		13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	RHBDL3	P58872	404 aa		13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	FMR1	Q06787	632 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	MFSD14B	Q5SR56	506 aa		13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	RBM26	Q5T8P6	1007 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	CDKAL1	Q5VV42	579 aa		13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	PPP1R13B	Q96KQ4	1090 aa		13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	EYA3	Q99504	573 aa		13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	NAA15	Q9BXJ9	866 aa	Known RBP	13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	CCSER1	Q9C0I3	900 aa		13.54	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	ITIH6	Q6UXX5	1313 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135		A0A087X0B3	334 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	hCG_1642624	A0A1W2PR95	340 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	STXBP3	O00186	592 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	POLRMT	O00411	1230 aa	Known RBP	13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	NR1I3	Q14994	352 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	DTHD1	Q6ZMT9	781 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	PDCL2	Q8N4E4	241 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	ANKRD20A12P	Q8NF67	263 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	CCDC51	Q96ER9	411 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	DYNLL2	Q96FJ2	89 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	C6orf50	Q9HD87	102 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	SWAP70	Q9UH65	585 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	ATP6V0A2	Q9Y487	856 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	KCNB1	Q14721	858 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	WWC2	Q6AWC2	1192 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	MAPKAPK5	Q8IW41	473 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	DPF2	Q92785	391 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	RRP36	Q96EU6	259 aa	Known RBP	13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	ERO1A	Q96HE7	468 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	PANX2	Q96RD6	677 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	SRRT	Q9BXP5	876 aa	Known RBP	13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	L2HGDH	Q9H9P8	463 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	INTS13	Q9NVM9	706 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	RWDD2A	Q9UIY3	292 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	PCDHA6	Q9UN73	950 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	PCDHA8	Q9Y5H6	950 aa		13.53	□□□□□ -0.24
U2AF1L4-213	ENST00000590135	GRXCR2	A6NFK2	248 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	USP27X	A6NNY8	438 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	KLRF2	D3W0D1	207 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	PPEF1	O14829	653 aa	Predicted RBP	13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	MCM7	P33993	719 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ETF1	P62495	437 aa	Known RBP	13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	RBM10	P98175	930 aa	Known RBP	13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	TRIM14	Q14142	442 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ASPRV1	Q53RT3	343 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	PPP1R18	Q6NYC8	613 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	NLGN1	Q8N2Q7	840 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	FLAD1	Q8NFF5	587 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	DISC1	Q9NRI5	854 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	SEC63	Q9UGP8	760 aa	Known RBP	13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	STX8	Q9UNK0	236 aa		13.52	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	USP17L3	A6NCW0	530 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	USP17L4	A6NCW7	530 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	LRRC10B	A6NIK2	292 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	PPP1R3G	B7ZBB8	358 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	FAM182B	Q5T319	152 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	USP17L1	Q7RTZ2	530 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ZNF710	Q8N1W2	664 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	STAG2	Q8N3U4	1231 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	PTCD2	Q8WV60	388 aa	Known RBP	13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	CGN	Q9P2M7	1197 aa	Known RBP	13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	POLL	Q9UGP5	575 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	JAG2	Q9Y219	1238 aa		13.51	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	WNT7A	O00755	349 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	CYTH3	O43739	400 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ZMYND10	O75800	440 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	SLC34A2	O95436	690 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	NPR1	P16066	1061 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ALDH1B1	P30837	517 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	STAT6	P42226	847 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	AFM	P43652	599 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	DDR1	Q08345	913 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	NONO	Q15233	471 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	GRIK5	Q16478	980 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	SOGA3	Q5TF21	947 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	HEATR3	Q7Z4Q2	680 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	GRAMD1C	Q8IYS0	662 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	NOC3L	Q8WTT2	800 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	CCDC47	Q96A33	483 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	BAG1	Q99933	345 aa	Predicted RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	CCDC94	Q9BW85	323 aa	Predicted RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	RIOX1	Q9H6W3	641 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ADD3	Q9UEY8	706 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	LIMA1	Q9UHB6	759 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	SLU7	O95391	586 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	TPM1	P09493	284 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	PBX1	P40424	430 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	UBA7	P41226	1012 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	FKBP1A	P62942	108 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	GABPA	Q06546	454 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	PAK1	Q13153	545 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	STIM1	Q13586	685 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	ZNF827	Q17R98	1081 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	HHIPL2	Q6UWX4	724 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	APTX	Q7Z2E3	356 aa	Known RBP	13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	TMEM139	Q8IV31	216 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	MED15	Q96RN5	788 aa		13.5	□□□□□ -0.25
U2AF1L4-213	ENST00000590135	MRI	Q9BWK5	157 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms