RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 C6orf15Q6UXA7 325 aaPredicted RBP10.05□□□□□ -0.8
ATG4D-210ENST00000588972 KIAA0907Q7Z7F0 614 aaPredicted RBP10.05□□□□□ -0.8
ATG4D-210ENST00000588972 NRSN2Q9GZP1 204 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
ATG4D-210ENST00000588972 LEMD3Q9Y2U8 911 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 PRKAB1Q9Y478 270 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 C10orf71Q711Q0 1435 aa10.05□□□□□ -0.8
ATG4D-210ENST00000588972 N4BP2Q86UW6 1770 aaPredicted RBP10.04□□□□□ -0.8
ATG4D-210ENST00000588972 ELOA3CA0A087WX78 387 aaPredicted RBP10.04□□□□□ -0.8
ATG4D-210ENST00000588972 ELOA3DA6NLF2 546 aaPredicted RBP10.04□□□□□ -0.8
ATG4D-210ENST00000588972 NEURL1BA8MQ27 555 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 RGS9O75916 674 aaPredicted RBP10.04□□□□□ -0.8
ATG4D-210ENST00000588972 DDAH1O94760 285 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 GUCY2CP25092 1073 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 ELOA3BQ3SY89 546 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 HSP90AB2PQ58FF8 381 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 MORC1Q86VD1 984 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 FAM178BQ8IXR5 827 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 JMYQ8N9B5 988 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 LINC00116Q8NCU8 138 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 ELOA3Q8NG57 546 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 TMEM40Q8WWA1 233 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 SLC7A3Q8WY07 619 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 PIGBQ92521 554 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 PCDH12Q9NPG4 1184 aa10.04□□□□□ -0.8
ATG4D-210ENST00000588972 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
ATG4D-210ENST00000588972 PLEKHG2Q9H7P9 1386 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 ECEL1O95672 775 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 MMP10P09238 476 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 ANAPC15P60006 121 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 INPP5AQ14642 412 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 LRFN4Q6PJG9 635 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 SMIM5Q71RC9 77 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 IL22RA1Q8N6P7 574 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 THAP3Q8WTV1 239 aaPredicted RBP10.03□□□□□ -0.8
ATG4D-210ENST00000588972 PLPPR2Q96GM1 343 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 CCDC86Q9H6F5 360 aaKnown RBP10.03□□□□□ -0.8
ATG4D-210ENST00000588972 KRT82Q9NSB4 513 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 POLKQ9UBT6 870 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 CORINQ9Y5Q5 1042 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 KDM2BQ8NHM5 1336 aa10.03□□□□□ -0.8
ATG4D-210ENST00000588972 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.8
ATG4D-210ENST00000588972 C4AP0C0L4 1744 aa10.02□□□□□ -0.8
ATG4D-210ENST00000588972 UPK3BL1B0FP48 263 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 UPK3BL2E5RIL1 263 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 PPP1R12AO14974 1030 aaPredicted RBP10.02□□□□□ -0.81
ATG4D-210ENST00000588972 DIAPH1O60610 1272 aaKnown RBP10.02□□□□□ -0.81
ATG4D-210ENST00000588972 CYP11A1P05108 521 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 GYS2P54840 703 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 TGFB2P61812 414 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 C19orf57Q0VDD7 668 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 POU4F3Q15319 338 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 ARSHQ5FYA8 562 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 MRM1Q6IN84 353 aaKnown RBP10.02□□□□□ -0.81
ATG4D-210ENST00000588972 TXNDC11Q6PKC3 985 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 C16orf86Q6ZW13 317 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 SPATC1Q76KD6 591 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 TAB3Q8N5C8 712 aaPredicted RBP10.02□□□□□ -0.81
ATG4D-210ENST00000588972 DNAJC5GQ8N7S2 189 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 ZSCAN1Q8NBB4 408 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 NUDT8Q8WV74 236 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 TMOD3Q9NYL9 352 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 PFDN2Q9UHV9 154 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 SNCAIPQ9Y6H5 919 aa10.02□□□□□ -0.81
ATG4D-210ENST00000588972 KDRP35968 1356 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 ARFGEF1Q9Y6D6 1849 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 EIF4EBP3O60516 100 aaPredicted RBP10.01□□□□□ -0.81
ATG4D-210ENST00000588972 DDX10Q13206 875 aaKnown RBP10.01□□□□□ -0.81
ATG4D-210ENST00000588972 ITPK1Q13572 414 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 ST13P5Q8NFI4 369 aaPredicted RBP10.01□□□□□ -0.81
ATG4D-210ENST00000588972 WNT8BQ93098 351 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 CORO1BQ9BR76 489 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 REV1Q9UBZ9 1251 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 ZMYM5Q9UJ78 669 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 STARD13Q9Y3M8 1113 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 PPME1Q9Y570 386 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 COL5A3P25940 1745 aaPredicted RBP10.01□□□□□ -0.81
ATG4D-210ENST00000588972 NPC1L1Q9UHC9 1359 aa10.01□□□□□ -0.81
ATG4D-210ENST00000588972 TNRC6CQ9HCJ0 1690 aaKnown RBP10□□□□□ -0.81
ATG4D-210ENST00000588972 LINC01387J3KSC0 135 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 MAOBP27338 520 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 MAP2K3P46734 347 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 ARL4DP49703 201 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 SSRP1Q08945 709 aaKnown RBP10□□□□□ -0.81
ATG4D-210ENST00000588972 TKFCQ3LXA3 575 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 OVOS1Q6IE37 1185 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 HDXQ7Z353 690 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 ZNF669Q96BR6 464 aaPredicted RBP10□□□□□ -0.81
ATG4D-210ENST00000588972 TMX1Q9H3N1 280 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 NMRK2Q9NPI5 230 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 GMIPQ9P107 970 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 GGA1Q9UJY5 639 aa10□□□□□ -0.81
ATG4D-210ENST00000588972 ZNF862O60290 1169 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 DNAJA2O60884 412 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 CTSBP07858 339 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 ACRP10323 421 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 ZYXQ15942 572 aaKnown RBP9.99□□□□□ -0.81
ATG4D-210ENST00000588972 C20orf204Q6ZNR8 217 aa9.99□□□□□ -0.81
ATG4D-210ENST00000588972 C16orf71Q8IYS4 520 aaPredicted RBP9.99□□□□□ -0.81
ATG4D-210ENST00000588972 ATG4CQ96DT6 458 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms