RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 PAGR1Q9BTK6 254 aa23.21■■□□□ 1.31
DNMT1-216ENST00000588952 RAVER2Q9HCJ3 691 aaKnown RBP23.21■■□□□ 1.31
DNMT1-216ENST00000588952 CPA4Q9UI42 421 aa23.21■■□□□ 1.31
DNMT1-216ENST00000588952 ZNF214Q9UL59 606 aaPredicted RBP23.21■■□□□ 1.31
DNMT1-216ENST00000588952 V9GY48 417 aaPredicted RBP23.21■■□□□ 1.31
DNMT1-216ENST00000588952 CEP350Q5VT06 3117 aa23.21■■□□□ 1.31
DNMT1-216ENST00000588952 ZBTB5O15062 677 aa23.2■■□□□ 1.3
DNMT1-216ENST00000588952 ZBED4O75132 1171 aa23.2■■□□□ 1.3
DNMT1-216ENST00000588952 FMNL1O95466 1100 aaPredicted RBP23.2■■□□□ 1.3
DNMT1-216ENST00000588952 PKN1Q16512 942 aa23.2■■□□□ 1.3
DNMT1-216ENST00000588952 SMARCC2Q8TAQ2 1214 aa23.2■■□□□ 1.3
DNMT1-216ENST00000588952 RRP36Q96EU6 259 aaKnown RBP23.2■■□□□ 1.3
DNMT1-216ENST00000588952 AGBL1Q96MI9 1066 aa23.2■■□□□ 1.3
DNMT1-216ENST00000588952 ZFYVE28Q9HCC9 887 aa23.2■■□□□ 1.3
DNMT1-216ENST00000588952 PRPF3O43395 683 aaKnown RBP23.19■■□□□ 1.3
DNMT1-216ENST00000588952 ALDH1A1P00352 501 aa23.19■■□□□ 1.3
DNMT1-216ENST00000588952 BCRP11274 1271 aa23.19■■□□□ 1.3
DNMT1-216ENST00000588952 FDPSP14324 419 aaKnown RBP23.19■■□□□ 1.3
DNMT1-216ENST00000588952 SSRP1Q08945 709 aaKnown RBP23.19■■□□□ 1.3
DNMT1-216ENST00000588952 Q3C1V9 767 aa23.19■■□□□ 1.3
DNMT1-216ENST00000588952 CPLX2Q6PUV4 134 aaKnown RBP23.19■■□□□ 1.3
DNMT1-216ENST00000588952 CPXCR1Q8N123 301 aa23.19■■□□□ 1.3
DNMT1-216ENST00000588952 ANKRD13CQ8N6S4 541 aa23.19■■□□□ 1.3
DNMT1-216ENST00000588952 RNF26Q9BY78 433 aaPredicted RBP23.19■■□□□ 1.3
DNMT1-216ENST00000588952 RABGAP1Q9Y3P9 1069 aa23.19■■□□□ 1.3
DNMT1-216ENST00000588952 STK36Q9NRP7 1315 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 PNMA6FA0A0J9YX94 578 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 TLR2O60603 784 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 TRPA1O75762 1119 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 CDKL5O76039 1030 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 TBC1D8O95759 1140 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 GCLCP48506 637 aaPredicted RBP23.18■■□□□ 1.3
DNMT1-216ENST00000588952 C17orf99Q6UX52 265 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 MB21D1Q8N884 522 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 GTF3C2Q8WUA4 911 aaPredicted RBP23.18■■□□□ 1.3
DNMT1-216ENST00000588952 DDX11Q96FC9 970 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 AIFM3Q96NN9 605 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 LLPHQ9BRT6 129 aaKnown RBP23.18■■□□□ 1.3
DNMT1-216ENST00000588952 MORF4L1Q9UBU8 362 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 SMCHD1A6NHR9 2005 aa23.18■■□□□ 1.3
DNMT1-216ENST00000588952 ATP2A1O14983 1001 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 ICAM1P05362 532 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 FDX1P10109 184 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 ERVK-9P63128 1117 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 ERVK-24P63145 666 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 GPKOWQ92917 476 aaPredicted RBP eCLIP23.17■■□□□ 1.33e-7■□□□□ 9
DNMT1-216ENST00000588952 SHISA4Q96DD7 197 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 CFHR5Q9BXR6 569 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 SPATC1LQ9H0A9 340 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 FOXD4L1Q9NU39 408 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 RIPK3Q9Y572 518 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 CTDP1Q9Y5B0 961 aaPredicted RBP23.17■■□□□ 1.3
DNMT1-216ENST00000588952 MYH6P13533 1939 aa23.17■■□□□ 1.3
DNMT1-216ENST00000588952 PLS1Q14651 629 aa23.16■■□□□ 1.3
DNMT1-216ENST00000588952 PFKFB3Q16875 520 aaPredicted RBP23.16■■□□□ 1.3
DNMT1-216ENST00000588952 USH1GQ495M9 461 aa23.16■■□□□ 1.3
DNMT1-216ENST00000588952 WWC2Q6AWC2 1192 aa23.16■■□□□ 1.3
DNMT1-216ENST00000588952 FBXO11Q86XK2 927 aa23.16■■□□□ 1.3
DNMT1-216ENST00000588952 COA7Q96BR5 231 aa23.16■■□□□ 1.3
DNMT1-216ENST00000588952 ORC3Q9UBD5 711 aaPredicted RBP23.16■■□□□ 1.3
DNMT1-216ENST00000588952 SEC63Q9UGP8 760 aaKnown RBP23.16■■□□□ 1.3
DNMT1-216ENST00000588952 CCPG1Q9ULG6 757 aa23.16■■□□□ 1.3
DNMT1-216ENST00000588952 PCNTO95613 3336 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 SCG2P13521 617 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 STAT3P40763 770 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 OAZ1P54368 228 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 FAM110CQ1W6H9 321 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 SNRNP48Q6IEG0 339 aaKnown RBP23.15■■□□□ 1.3
DNMT1-216ENST00000588952 TYW1BQ6NUM6 668 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 TRIM22Q8IYM9 498 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 MOV10L1Q9BXT6 1211 aaKnown RBP23.15■■□□□ 1.3
DNMT1-216ENST00000588952 TEX13BQ9BXU2 312 aa23.15■■□□□ 1.3
DNMT1-216ENST00000588952 DEXIO95424 95 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 SLC4A3P48751 1232 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 MAP2K1Q02750 393 aaPredicted RBP23.14■■□□□ 1.29
DNMT1-216ENST00000588952 HEATR3Q7Z4Q2 680 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 RIOX2Q8IUF8 465 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 GPRC5AQ8NFJ5 357 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 AMNQ9BXJ7 453 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 PORCNQ9H237 461 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 WBP1LQ9NX94 342 aa23.14■■□□□ 1.29
DNMT1-216ENST00000588952 STXBP3O00186 592 aa23.13■■□□□ 1.29
DNMT1-216ENST00000588952 ANP32AP39687 249 aaKnown RBP23.13■■□□□ 1.29
DNMT1-216ENST00000588952 AKAP17AQ02040 695 aaKnown RBP23.13■■□□□ 1.29
DNMT1-216ENST00000588952 HOMER2Q9NSB8 354 aa23.13■■□□□ 1.29
DNMT1-216ENST00000588952 SAGE1Q9NXZ1 904 aa23.13■■□□□ 1.29
DNMT1-216ENST00000588952 ALAS1P13196 640 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 GJB2P29033 226 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 BECN1Q14457 450 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 MUM1L1Q5H9M0 696 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 SPRYD3Q8NCJ5 442 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 CLEC4DQ8WXI8 215 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 INTS4Q96HW7 963 aaKnown RBP23.12■■□□□ 1.29
DNMT1-216ENST00000588952 GJB4Q9NTQ9 266 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
DNMT1-216ENST00000588952 TSKSQ9UJT2 592 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.12■■□□□ 1.29
DNMT1-216ENST00000588952 PCDHA1Q9Y5I3 950 aa23.12■■□□□ 1.29
DNMT1-216ENST00000588952 ZSWIM8A7E2V4 1837 aa23.11■■□□□ 1.29
DNMT1-216ENST00000588952 OPLAHO14841 1288 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms