RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 EFCC1Q9HA90 598 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 SLC38A10Q9HBR0 1119 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 FAM217BQ9NTX9 383 aaPredicted RBP16.96■□□□□ 0.31
CNN1-208ENST00000588935 DOCK3Q8IZD9 2030 aa16.96■□□□□ 0.3
CNN1-208ENST00000588935 CYTH3O43739 400 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 LARGE1O95461 756 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 FMNL1O95466 1100 aaPredicted RBP16.95■□□□□ 0.3
CNN1-208ENST00000588935 ALAS1P13196 640 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 EVCP57679 992 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 KIF22Q14807 665 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 FAM110CQ1W6H9 321 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 SNRNP48Q6IEG0 339 aaKnown RBP16.95■□□□□ 0.3
CNN1-208ENST00000588935 TMTC3Q6ZXV5 915 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 REPS2Q8NFH8 660 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 ZNF274Q96GC6 653 aaPredicted RBP16.95■□□□□ 0.3
CNN1-208ENST00000588935 MOV10L1Q9BXT6 1211 aaKnown RBP16.95■□□□□ 0.3
CNN1-208ENST00000588935 PORCNQ9H237 461 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 HOMER2Q9NSB8 354 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 RBM28Q9NW13 759 aaKnown RBP16.95■□□□□ 0.3
CNN1-208ENST00000588935 MORF4L1Q9UBU8 362 aa16.95■□□□□ 0.3
CNN1-208ENST00000588935 ZSWIM8A7E2V4 1837 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 ST18O60284 1047 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 PSMC4P43686 418 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 CCNA1P78396 465 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 ME3Q16798 604 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 QRICH1Q2TAL8 776 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 USH1GQ495M9 461 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 LZTS2Q9BRK4 669 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 RANBP17Q9H2T7 1088 aaKnown RBP16.94■□□□□ 0.3
CNN1-208ENST00000588935 RIOX1Q9H6W3 641 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 ZNF214Q9UL59 606 aaPredicted RBP16.94■□□□□ 0.3
CNN1-208ENST00000588935 CCPG1Q9ULG6 757 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 RIPK3Q9Y572 518 aa16.94■□□□□ 0.3
CNN1-208ENST00000588935 CPLX1O14810 134 aa16.93■□□□□ 0.3
CNN1-208ENST00000588935 CD2BP2O95400 341 aaKnown RBP16.93■□□□□ 0.3
CNN1-208ENST00000588935 FDX1P10109 184 aa16.93■□□□□ 0.3
CNN1-208ENST00000588935 ERCC3P19447 782 aa16.93■□□□□ 0.3
CNN1-208ENST00000588935 CTGFP29279 349 aa16.93■□□□□ 0.3
CNN1-208ENST00000588935 LACTBP83111 547 aaPredicted RBP16.93■□□□□ 0.3
CNN1-208ENST00000588935 CAP1Q01518 475 aa16.93■□□□□ 0.3
CNN1-208ENST00000588935 SCRN1Q12765 414 aa16.93■□□□□ 0.3
CNN1-208ENST00000588935 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
CNN1-208ENST00000588935 V9GY48 417 aaPredicted RBP16.93■□□□□ 0.3
CNN1-208ENST00000588935 ZNF536O15090 1300 aa16.93■□□□□ 0.3
CNN1-208ENST00000588935 CEP350Q5VT06 3117 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 CCDC196A0A1B0GTZ2 297 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 TNPO2O14787 897 aaKnown RBP16.92■□□□□ 0.3
CNN1-208ENST00000588935 PFKFB2O60825 505 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 FBXO11Q86XK2 927 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 PHKBQ93100 1093 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 ERO1AQ96HE7 468 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 TEX13BQ9BXU2 312 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 MGAMO43451 1857 aa16.92■□□□□ 0.3
CNN1-208ENST00000588935 ZBTB5O15062 677 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 ICAM1P05362 532 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 RCAN1P53805 252 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 FCGRTP55899 365 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 COA7Q96BR5 231 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 TRIM47Q96LD4 638 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 TRERF1Q96PN7 1200 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 SPZ1Q9BXG8 430 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
CNN1-208ENST00000588935 SEC63Q9UGP8 760 aaKnown RBP16.91■□□□□ 0.3
CNN1-208ENST00000588935 ZNFX1Q9P2E3 1918 aaKnown RBP16.91■□□□□ 0.3
CNN1-208ENST00000588935 A0A0G2JMZ2 1700 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 PNMA6FA0A0J9YX94 578 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 PPP1R11O60927 126 aaPredicted RBP16.9■□□□□ 0.3
CNN1-208ENST00000588935 SLC25A27O95847 323 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 SMARCA1P28370 1054 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 OAZ1P54368 228 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 PPP2R5BQ15173 497 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 MUM1L1Q5H9M0 696 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 GPR142Q7Z601 462 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 PLEKHH3Q7Z736 793 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 CCDC83Q8IWF9 413 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 MTMR8Q96EF0 704 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 ZSCAN31Q96LW9 406 aaPredicted RBP16.9■□□□□ 0.3
CNN1-208ENST00000588935 RNF146Q9NTX7 359 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
CNN1-208ENST00000588935 ATP2A1O14983 1001 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 MAPK4P31152 587 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 AKAP17AQ02040 695 aaKnown RBP16.89■□□□□ 0.29
CNN1-208ENST00000588935 SSRP1Q08945 709 aaKnown RBP16.89■□□□□ 0.29
CNN1-208ENST00000588935 FUT2Q10981 343 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 NTRK3Q16288 839 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
CNN1-208ENST00000588935 GPKOWQ92917 476 aaPredicted RBP eCLIP16.89■□□□□ 0.29
CNN1-208ENST00000588935 AMNQ9BXJ7 453 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 GABRQQ9UN88 632 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 PCDHA1Q9Y5I3 950 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 IVNS1ABPQ9Y6Y0 642 aa16.89■□□□□ 0.29
CNN1-208ENST00000588935 NOM1Q5C9Z4 860 aaKnown RBP16.88■□□□□ 0.29
CNN1-208ENST00000588935 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
CNN1-208ENST00000588935 HEATR3Q7Z4Q2 680 aa16.88■□□□□ 0.29
CNN1-208ENST00000588935 SHCBP1Q8NEM2 672 aa16.88■□□□□ 0.29
CNN1-208ENST00000588935 TBC1D5Q92609 795 aa16.88■□□□□ 0.29
CNN1-208ENST00000588935 GTF3C6Q969F1 213 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms