RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 FAM43AQ8N2R8 423 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 ATG4CQ96DT6 458 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 MTMR8Q96EF0 704 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 ALG1Q9BT22 464 aa16.32■□□□□ 0.2
CCDC130-208ENST00000588071 RANBP17Q9H2T7 1088 aaKnown RBP16.32■□□□□ 0.2
CCDC130-208ENST00000588071 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
CCDC130-208ENST00000588071 SPDYE16A6NNV3 312 aaPredicted RBP16.31■□□□□ 0.2
CCDC130-208ENST00000588071 VWA5AO00534 786 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 SCG2P13521 617 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 HSPA6P17066 643 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 XBP1P17861 261 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 TM4SF4P48230 202 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 PFKFB3Q16875 520 aaPredicted RBP16.31■□□□□ 0.2
CCDC130-208ENST00000588071 QRICH1Q2TAL8 776 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 CPXCR1Q8N123 301 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
CCDC130-208ENST00000588071 ZIC5Q96T25 663 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
CCDC130-208ENST00000588071 SMCHD1A6NHR9 2005 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 CYP2C8P10632 490 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 VEGFBP49765 207 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 FOSBP53539 338 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 HERVK_113P62684 666 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 TRAF1Q13077 416 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 PLS1Q14651 629 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 PKN1Q16512 942 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
CCDC130-208ENST00000588071 HEATR3Q7Z4Q2 680 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 FBXO11Q86XK2 927 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 MB21D1Q8N884 522 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
CCDC130-208ENST00000588071 PARK7Q99497 189 aaKnown RBP16.3■□□□□ 0.2
CCDC130-208ENST00000588071 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 ZCCHC17Q9NP64 241 aaKnown RBP16.3■□□□□ 0.2
CCDC130-208ENST00000588071 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
CCDC130-208ENST00000588071 IGF2BP3O00425 579 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCDC130-208ENST00000588071 PDCP20941 246 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 MAP2K2P36507 400 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 TRIM29Q14134 588 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
CCDC130-208ENST00000588071 COA7Q96BR5 231 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 C8orf76Q96K31 380 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 AIFM3Q96NN9 605 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 RAVER2Q9HCJ3 691 aaKnown RBP16.29■□□□□ 0.2
CCDC130-208ENST00000588071 PNMA2Q9UL42 364 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 CCPG1Q9ULG6 757 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 PCDHA1Q9Y5I3 950 aa16.29■□□□□ 0.2
CCDC130-208ENST00000588071 H3BQV1 296 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 ICAM1P05362 532 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 TAF1CQ15572 869 aaPredicted RBP16.28■□□□□ 0.2
CCDC130-208ENST00000588071 USH1GQ495M9 461 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 IFFO2Q5TF58 517 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 LBX2Q6XYB7 198 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
CCDC130-208ENST00000588071 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 ZFYVE28Q9HCC9 887 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 VPS54Q9P1Q0 977 aa16.28■□□□□ 0.2
CCDC130-208ENST00000588071 ALDH1A1P00352 501 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 STAT3P40763 770 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 GCLCP48506 637 aaPredicted RBP16.27■□□□□ 0.2
CCDC130-208ENST00000588071 OAZ1P54368 228 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 NAPAP54920 295 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 TMEM132BQ14DG7 1078 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 WWC2Q6AWC2 1192 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
CCDC130-208ENST00000588071 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 BARHL2Q9NY43 387 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.2
CCDC130-208ENST00000588071 ZNF536O15090 1300 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 STXBP3O00186 592 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 PPP1R11O60927 126 aaPredicted RBP16.26■□□□□ 0.19
CCDC130-208ENST00000588071 ALAS1P13196 640 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 NLRP5P59047 1200 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 SNRNP48Q6IEG0 339 aaKnown RBP16.26■□□□□ 0.19
CCDC130-208ENST00000588071 REPS2Q8NFH8 660 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 CCDC148Q8NFR7 591 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 BTBD7Q9P203 1132 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 RBPJLQ9UBG7 517 aa16.26■□□□□ 0.19
CCDC130-208ENST00000588071 MRPL11Q9Y3B7 192 aaKnown RBP16.26■□□□□ 0.19
CCDC130-208ENST00000588071 ABCB11O95342 1321 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 SMCO2A6NFE2 343 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 PDIA4P13667 645 aaKnown RBP16.25■□□□□ 0.19
CCDC130-208ENST00000588071 SAFBQ15424 915 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC130-208ENST00000588071 ANKRD13CQ8N6S4 541 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 GPRC5AQ8NFJ5 357 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 TRERF1Q96PN7 1200 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 TEX13BQ9BXU2 312 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 SPATC1LQ9H0A9 340 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 GJB4Q9NTQ9 266 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
CCDC130-208ENST00000588071 CA12O43570 354 aa16.24■□□□□ 0.19
CCDC130-208ENST00000588071 STX6O43752 255 aa16.24■□□□□ 0.19
CCDC130-208ENST00000588071 PEX10O60683 326 aa16.24■□□□□ 0.19
CCDC130-208ENST00000588071 CNMDO75829 334 aa16.24■□□□□ 0.19
CCDC130-208ENST00000588071 TAL1P17542 331 aaPredicted RBP16.24■□□□□ 0.19
CCDC130-208ENST00000588071 SYT1P21579 422 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms