RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TRPM4Q8TD43 1214 aa22.66■■□□□ 1.22
TRIM47-204ENST00000587339 RNF181Q9P0P0 153 aa22.66■■□□□ 1.22
TRIM47-204ENST00000587339 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.66■■□□□ 1.22
TRIM47-204ENST00000587339 TMEM232C9JQI7 657 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 YBX3P16989 372 aaKnown RBP eCLIP22.65■■□□□ 1.22
TRIM47-204ENST00000587339 ADCY7P51828 1080 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 ATP2C1P98194 919 aaPredicted RBP22.65■■□□□ 1.22
TRIM47-204ENST00000587339 INF2Q27J81 1249 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 SASS6Q6UVJ0 657 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 FERMT2Q96AC1 680 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 SBF1O95248 1867 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 EPS15P42566 896 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 CDC37Q16543 378 aaPredicted RBP22.65■■□□□ 1.22
TRIM47-204ENST00000587339 QRICH1Q2TAL8 776 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 SPECC1Q5M775 1068 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 FAM13BQ9NYF5 915 aa22.65■■□□□ 1.22
TRIM47-204ENST00000587339 TYRO3Q06418 890 aa22.64■■□□□ 1.21
TRIM47-204ENST00000587339 NONOQ15233 471 aaKnown RBP eCLIP22.64■■□□□ 1.21
TRIM47-204ENST00000587339 CSRNP2Q9H175 543 aa22.64■■□□□ 1.21
TRIM47-204ENST00000587339 BIN2Q9UBW5 565 aaPredicted RBP22.64■■□□□ 1.21
TRIM47-204ENST00000587339 KCNH3Q9ULD8 1083 aa22.64■■□□□ 1.21
TRIM47-204ENST00000587339 DDNO94850 711 aaPredicted RBP22.63■■□□□ 1.21
TRIM47-204ENST00000587339 NBPF12Q5TAG4 269 aaPredicted RBP22.63■■□□□ 1.21
TRIM47-204ENST00000587339 SYDE2Q5VT97 1194 aa22.63■■□□□ 1.21
TRIM47-204ENST00000587339 TIGD1Q96MW7 591 aa22.63■■□□□ 1.21
TRIM47-204ENST00000587339 BTNL9Q6UXG8 535 aa22.63■■□□□ 1.21
TRIM47-204ENST00000587339 ANP32BQ92688 251 aaKnown RBP22.63■■□□□ 1.21
TRIM47-204ENST00000587339 VCPKMTQ9H867 229 aa22.63■■□□□ 1.21
TRIM47-204ENST00000587339 RIC8AQ9NPQ8 531 aa22.63■■□□□ 1.21
TRIM47-204ENST00000587339 GGA3Q9NZ52 723 aa22.63■■□□□ 1.21
TRIM47-204ENST00000587339 CTNND1O60716 968 aaKnown RBP22.62■■□□□ 1.21
TRIM47-204ENST00000587339 STAT2P52630 851 aa22.62■■□□□ 1.21
TRIM47-204ENST00000587339 KIAA1755Q5JYT7 1200 aa22.62■■□□□ 1.21
TRIM47-204ENST00000587339 JAKMIP3Q5VZ66 844 aa22.62■■□□□ 1.21
TRIM47-204ENST00000587339 DCAF15Q66K64 600 aa22.62■■□□□ 1.21
TRIM47-204ENST00000587339 CUL5Q93034 780 aa22.62■■□□□ 1.21
TRIM47-204ENST00000587339 HOOK2Q96ED9 719 aa22.62■■□□□ 1.21
TRIM47-204ENST00000587339 PCDHA1Q9Y5I3 950 aa22.62■■□□□ 1.21
TRIM47-204ENST00000587339 MRPL12P52815 198 aaKnown RBP22.61■■□□□ 1.21
TRIM47-204ENST00000587339 ZYXQ15942 572 aaKnown RBP22.61■■□□□ 1.21
TRIM47-204ENST00000587339 GINM1Q9NU53 330 aa22.61■■□□□ 1.21
TRIM47-204ENST00000587339 HIRAP54198 1017 aaPredicted RBP22.61■■□□□ 1.21
TRIM47-204ENST00000587339 FAM83BQ5T0W9 1011 aa22.61■■□□□ 1.21
TRIM47-204ENST00000587339 ARL6IP4Q66PJ3 421 aaKnown RBP22.61■■□□□ 1.21
TRIM47-204ENST00000587339 ILDR2Q71H61 639 aa22.61■■□□□ 1.21
TRIM47-204ENST00000587339 NEK8Q86SG6 692 aa22.61■■□□□ 1.21
TRIM47-204ENST00000587339 CCDC84Q86UT8 332 aaPredicted RBP22.61■■□□□ 1.21
TRIM47-204ENST00000587339 GLIS2Q9BZE0 524 aaPredicted RBP22.61■■□□□ 1.21
TRIM47-204ENST00000587339 PSTPIP2Q9H939 334 aa22.61■■□□□ 1.21
TRIM47-204ENST00000587339 TMEM260Q9NX78 707 aa22.61■■□□□ 1.21
TRIM47-204ENST00000587339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.6■■□□□ 1.21
TRIM47-204ENST00000587339 VWA3AA6NCI4 1184 aa22.6■■□□□ 1.21
TRIM47-204ENST00000587339 LMOD1P29536 600 aaPredicted RBP22.6■■□□□ 1.21
TRIM47-204ENST00000587339 TBCKQ8TEA7 893 aa22.6■■□□□ 1.21
TRIM47-204ENST00000587339 FEZ1Q99689 392 aa22.6■■□□□ 1.21
TRIM47-204ENST00000587339 AMNQ9BXJ7 453 aa22.6■■□□□ 1.21
TRIM47-204ENST00000587339 PRR12Q9ULL5 1215 aa22.6■■□□□ 1.21
TRIM47-204ENST00000587339 LETM2Q2VYF4 491 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 C9orf131Q5VYM1 1079 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 ZNF341Q9BYN7 854 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 GLT8D2Q9H1C3 349 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 PRAMEF18Q5VWM3 479 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 FBXO11Q86XK2 927 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 C4orf32Q8N8J7 132 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 ERCC4Q92889 916 aaPredicted RBP22.59■■□□□ 1.21
TRIM47-204ENST00000587339 PPP2R3BQ9Y5P8 575 aa22.59■■□□□ 1.21
TRIM47-204ENST00000587339 CCNT1O60563 726 aaKnown RBP22.58■■□□□ 1.21
TRIM47-204ENST00000587339 SNAP25P60880 206 aa22.58■■□□□ 1.21
TRIM47-204ENST00000587339 LONRF3Q496Y0 759 aa22.58■■□□□ 1.21
TRIM47-204ENST00000587339 ANO6Q4KMQ2 910 aa22.58■■□□□ 1.21
TRIM47-204ENST00000587339 USP49Q70CQ1 688 aa22.58■■□□□ 1.21
TRIM47-204ENST00000587339 CNNM3Q8NE01 707 aa22.58■■□□□ 1.21
TRIM47-204ENST00000587339 KIAA1468Q9P260 1216 aa22.58■■□□□ 1.21
TRIM47-204ENST00000587339 LAD1O00515 517 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 POLR2DO15514 142 aaKnown RBP22.57■■□□□ 1.2
TRIM47-204ENST00000587339 CLK2P49760 499 aaKnown RBP22.57■■□□□ 1.2
TRIM47-204ENST00000587339 UBE2SQ16763 222 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 KRBA2Q6ZNG9 492 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 CHURC1Q8WUH1 139 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 EPSTI1Q96J88 318 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 ADARB2Q9NS39 739 aaKnown RBP22.57■■□□□ 1.2
TRIM47-204ENST00000587339 ATAD5Q96QE3 1844 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 INPP5BP32019 993 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 FAM200AQ8TCP9 573 aa22.57■■□□□ 1.2
TRIM47-204ENST00000587339 SYMPKQ92797 1274 aaKnown RBP22.57■■□□□ 1.2
TRIM47-204ENST00000587339 UVSSAQ2YD98 709 aa22.56■■□□□ 1.2
TRIM47-204ENST00000587339 USH1GQ495M9 461 aa22.56■■□□□ 1.2
TRIM47-204ENST00000587339 PDILTQ8N807 584 aa22.56■■□□□ 1.2
TRIM47-204ENST00000587339 PLA2G6O60733 806 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 ORC2Q13416 577 aaPredicted RBP22.55■■□□□ 1.2
TRIM47-204ENST00000587339 ZRSR1Q15695 479 aaKnown RBP22.55■■□□□ 1.2
TRIM47-204ENST00000587339 IL17AQ16552 155 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 STX1AQ16623 288 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 WRNIP1Q96S55 665 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 TMEM60Q9H2L4 133 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 ZNF112Q9UJU3 913 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 PITPNM2Q9BZ72 1349 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 CAVIN2O95810 425 aa22.55■■□□□ 1.2
TRIM47-204ENST00000587339 LONP1P36776 959 aaKnown RBP22.55■■□□□ 1.2
TRIM47-204ENST00000587339 DTHD1Q6ZMT9 781 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms