RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 PLP2Q04941 152 aa6.87□□□□□ -1.31
ZNF540-204ENST00000586792 SHISA4Q96DD7 197 aa6.87□□□□□ -1.31
ZNF540-204ENST00000586792 LUC7LQ9NQ29 371 aaKnown RBP6.87□□□□□ -1.31
ZNF540-204ENST00000586792 MYRFQ9Y2G1 1151 aa6.87□□□□□ -1.31
ZNF540-204ENST00000586792 UNC13BO14795 1591 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 SPATA31D1Q6ZQQ2 1576 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 EFCAB6Q5THR3 1501 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 ERVK-7P63135 1459 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 PLA2R1Q13018 1463 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 RRBP1Q9P2E9 1410 aaKnown RBP6.86□□□□□ -1.31
ZNF540-204ENST00000586792 HMGB1P09429 215 aaKnown RBP6.86□□□□□ -1.31
ZNF540-204ENST00000586792 PLCB3Q01970 1234 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 ENOX2Q16206 610 aaKnown RBP6.86□□□□□ -1.31
ZNF540-204ENST00000586792 ADGRF1Q5T601 910 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 OLFML2BQ68BL8 750 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.86□□□□□ -1.31
ZNF540-204ENST00000586792 FRMD5Q7Z6J6 570 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 GAL3ST3Q96A11 431 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 TMEM87BQ96K49 555 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 TJP2Q9UDY2 1190 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 STRCQ7RTU9 1775 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 GCC2Q8IWJ2 1684 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 LMTK2Q8IWU2 1503 aa6.86□□□□□ -1.31
ZNF540-204ENST00000586792 ARHGAP31Q2M1Z3 1444 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 TET3O43151 1660 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 PGRP06401 933 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 CELA3AP09093 270 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 TMC7Q7Z402 723 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 THEMISQ8N1K5 641 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-204ENST00000586792 DTWD2Q8NBA8 298 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 DNAJB8Q8NHS0 232 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 FBF1Q8TES7 1133 aa6.85□□□□□ -1.31
ZNF540-204ENST00000586792 DPH2Q9BQC3 489 aaPredicted RBP6.85□□□□□ -1.31
ZNF540-204ENST00000586792 PTPRTO14522 1441 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 VWDEQ8N2E2 1590 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 INSRRP14616 1297 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 LMNB1P20700 586 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 PDE4BQ07343 736 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 CNKSR3Q6P9H4 555 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 SV2BQ7L1I2 683 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 LINC01599Q8WXQ3 324 aa6.84□□□□□ -1.31
ZNF540-204ENST00000586792 RPRD2Q5VT52 1461 aaKnown RBP6.84□□□□□ -1.31
ZNF540-204ENST00000586792 IQGAP3Q86VI3 1631 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 GFRA2O00451 464 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 ABLIM1O14639 778 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 DSC3Q14574 896 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 MCATQ8IVS2 390 aaKnown RBP6.83□□□□□ -1.32
ZNF540-204ENST00000586792 GPR20Q99678 358 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 CRTAC1Q9NQ79 661 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 CNOT11Q9UKZ1 510 aaKnown RBP6.83□□□□□ -1.32
ZNF540-204ENST00000586792 UBR1Q8IWV7 1749 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 CFAP65Q6ZU64 1925 aaKnown RBP6.83□□□□□ -1.32
ZNF540-204ENST00000586792 PIK3C2BO00750 1634 aa6.83□□□□□ -1.32
ZNF540-204ENST00000586792 KDM5AP29375 1690 aaKnown RBP6.82□□□□□ -1.32
ZNF540-204ENST00000586792 IRS4O14654 1257 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-204ENST00000586792 CILPO75339 1184 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 CDK8P49336 464 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 EPHB3P54753 998 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 PUM1Q14671 1186 aaKnown RBP eCLIP6.82□□□□□ -1.32
ZNF540-204ENST00000586792 VMACQ2NL98 169 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 NLRX1Q86UT6 975 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 SIRT2Q8IXJ6 389 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 LINC01356Q8N9X3 169 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 OSBPL7Q9BZF2 842 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 CNTD2Q9H8S5 307 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 PALD1Q9ULE6 856 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 NUP155O75694 1391 aa6.82□□□□□ -1.32
ZNF540-204ENST00000586792 ADGRB3O60242 1522 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 IQGAP1P46940 1657 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 RBAK-RBAKDNI3L0D1 243 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 VIPR1P32241 457 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 RPS26P62854 115 aaKnown RBP6.81□□□□□ -1.32
ZNF540-204ENST00000586792 TEKQ02763 1124 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 TTBK2Q6IQ55 1244 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 CCDC82Q8N4S0 544 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 SYT8Q8NBV8 401 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 BDH2Q9BUT1 245 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 ADAM7Q9H2U9 754 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 EPB41L4AQ9HCS5 686 aaPredicted RBP6.81□□□□□ -1.32
ZNF540-204ENST00000586792 EBF1Q9UH73 591 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 ADAM30Q9UKF2 790 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 EID1Q9Y6B2 187 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 E9PCH4 1651 aa6.81□□□□□ -1.32
ZNF540-204ENST00000586792 SYNMO15061 1565 aa6.8□□□□□ -1.32
ZNF540-204ENST00000586792 GALK1P51570 392 aa6.8□□□□□ -1.32
ZNF540-204ENST00000586792 SLC14A2Q15849 920 aa6.8□□□□□ -1.32
ZNF540-204ENST00000586792 TXNDC2Q86VQ3 553 aa6.8□□□□□ -1.32
ZNF540-204ENST00000586792 RNF141Q8WVD5 230 aa6.8□□□□□ -1.32
ZNF540-204ENST00000586792 FAM8A1Q9UBU6 413 aa6.8□□□□□ -1.32
ZNF540-204ENST00000586792 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
ZNF540-204ENST00000586792 SCAF11Q99590 1463 aaKnown RBP6.79□□□□□ -1.32
ZNF540-204ENST00000586792 SPHKAPQ2M3C7 1700 aa6.79□□□□□ -1.32
ZNF540-204ENST00000586792 NEURL4Q96JN8 1562 aa6.79□□□□□ -1.32
ZNF540-204ENST00000586792 HFM1A2PYH4 1435 aa6.79□□□□□ -1.32
ZNF540-204ENST00000586792 NPHP4O75161 1426 aaPredicted RBP6.79□□□□□ -1.32
ZNF540-204ENST00000586792 NAIPQ13075 1403 aa6.79□□□□□ -1.32
ZNF540-204ENST00000586792 TREHO43280 583 aa6.79□□□□□ -1.32
ZNF540-204ENST00000586792 YBX1P67809 324 aaKnown RBP6.79□□□□□ -1.32
ZNF540-204ENST00000586792 FAM129CQ86XR2 697 aa6.79□□□□□ -1.32
ZNF540-204ENST00000586792 MZB1Q8WU39 189 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms