RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 ZNF213O14771 459 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 FOXP2O15409 715 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 NOVP48745 357 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 ATN1P54259 1190 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-209ENST00000586538 RTP1P59025 263 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 SLC39A5Q6ZMH5 540 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 PLEKHM2Q8IWE5 1019 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 PCSK9Q8NBP7 692 aaKnown RBP13.25□□□□□ -0.29
ACTN4-209ENST00000586538 MPHOSPH6Q99547 160 aaKnown RBP13.25□□□□□ -0.29
ACTN4-209ENST00000586538 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 RNF146Q9NTX7 359 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 CTNNA3Q9UI47 895 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 ZHX1Q9UKY1 873 aaPredicted RBP13.25□□□□□ -0.29
ACTN4-209ENST00000586538 PHF24Q9UPV7 400 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 ATP11BQ9Y2G3 1177 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 RIPK3Q9Y572 518 aa13.25□□□□□ -0.29
ACTN4-209ENST00000586538 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 POTEB2H3BUK9 544 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 DUSP11O75319 330 aaKnown RBP13.24□□□□□ -0.29
ACTN4-209ENST00000586538 ZNF865P0CJ78 1059 aaPredicted RBP13.24□□□□□ -0.29
ACTN4-209ENST00000586538 SNX17Q15036 470 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 IMMTQ16891 758 aaKnown RBP13.24□□□□□ -0.29
ACTN4-209ENST00000586538 LRIT3Q3SXY7 679 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 PRAMEF19Q5SWL8 479 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 ANO1Q5XXA6 986 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 KCTD1Q719H9 257 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 EXOC6Q8TAG9 804 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
ACTN4-209ENST00000586538 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.24□□□□□ -0.29
ACTN4-209ENST00000586538 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 ICAM1P05362 532 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 ALAS1P13196 640 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 ACVR2BQ13705 512 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
ACTN4-209ENST00000586538 GPATCH4Q5T3I0 446 aaKnown RBP13.23□□□□□ -0.29
ACTN4-209ENST00000586538 CWC27Q6UX04 472 aaKnown RBP13.23□□□□□ -0.29
ACTN4-209ENST00000586538 ARMCX2Q7L311 632 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
ACTN4-209ENST00000586538 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 TRERF1Q96PN7 1200 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 DSCC1Q9BVC3 393 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 CNNM2Q9H8M5 875 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
ACTN4-209ENST00000586538 CCPG1Q9ULG6 757 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 PRR12Q9ULL5 1215 aa13.23□□□□□ -0.29
ACTN4-209ENST00000586538 RAD50Q92878 1312 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
ACTN4-209ENST00000586538 B4DLN1 442 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 NMT2O60551 498 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 CST5P28325 142 aaPredicted RBP13.22□□□□□ -0.29
ACTN4-209ENST00000586538 MRPL12P52815 198 aaKnown RBP13.22□□□□□ -0.29
ACTN4-209ENST00000586538 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 BTNL9Q6UXG8 535 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 DGKHQ86XP1 1220 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 GLT1D1Q96MS3 346 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 KRT23Q9C075 422 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 MAF1Q9H063 256 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 RANBP17Q9H2T7 1088 aaKnown RBP13.22□□□□□ -0.29
ACTN4-209ENST00000586538 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 MTMR7Q9Y216 660 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 TACC3Q9Y6A5 838 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 LAMA4Q16363 1823 aa13.22□□□□□ -0.29
ACTN4-209ENST00000586538 ZNF536O15090 1300 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 SYNRGQ9UMZ2 1314 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 A0A1W2PQ45 241 aaPredicted RBP13.21□□□□□ -0.29
ACTN4-209ENST00000586538 A0A1W2PQY0 241 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 ZEB2O60315 1214 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 ADAMTS4O75173 837 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 SNAI1O95863 264 aaPredicted RBP13.21□□□□□ -0.29
ACTN4-209ENST00000586538 PGK1P00558 417 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 IGHDP01880 384 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 HAND2P61296 217 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 MDM2Q00987 491 aaPredicted RBP13.21□□□□□ -0.29
ACTN4-209ENST00000586538 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 SYDE2Q5VT97 1194 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 FAM133AQ8N9E0 248 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 AGBL1Q96MI9 1066 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 TMEM47Q9BQJ4 181 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 SEZ6LQ9BYH1 1024 aa13.21□□□□□ -0.29
ACTN4-209ENST00000586538 A1CFQ9NQ94 594 aaKnown RBP13.21□□□□□ -0.29
ACTN4-209ENST00000586538 PRDM5Q9NQX1 630 aaPredicted RBP13.21□□□□□ -0.29
ACTN4-209ENST00000586538 ELP1O95163 1332 aa13.2□□□□□ -0.3
ACTN4-209ENST00000586538 DCDC2CA8MYV0 355 aa13.2□□□□□ -0.3
ACTN4-209ENST00000586538 CLTBP09497 229 aa13.2□□□□□ -0.3
ACTN4-209ENST00000586538 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
ACTN4-209ENST00000586538 PDHBP11177 359 aa13.2□□□□□ -0.3
ACTN4-209ENST00000586538 TAL1P17542 331 aaPredicted RBP13.2□□□□□ -0.3
ACTN4-209ENST00000586538 FERMT2Q96AC1 680 aa13.2□□□□□ -0.3
ACTN4-209ENST00000586538 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
ACTN4-209ENST00000586538 KAT14Q9H8E8 782 aa13.2□□□□□ -0.3
ACTN4-209ENST00000586538 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
ACTN4-209ENST00000586538 WDR19Q8NEZ3 1342 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 CABYRO75952 493 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 ACLYP53396 1101 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 GJA9P57773 515 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 ZNF543Q08ER8 600 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 TRDNQ13061 729 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms