RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 DTHD1Q6ZMT9 781 aa16.12■□□□□ 0.17
LIG3-205ENST00000585941 NEK8Q86SG6 692 aa16.12■□□□□ 0.17
LIG3-205ENST00000585941 IQUBQ8NA54 791 aa16.12■□□□□ 0.17
LIG3-205ENST00000585941 SMARCE1Q969G3 411 aa16.12■□□□□ 0.17
LIG3-205ENST00000585941 ZBED3Q96IU2 234 aaPredicted RBP16.12■□□□□ 0.17
LIG3-205ENST00000585941 RIC8AQ9NPQ8 531 aa16.12■□□□□ 0.17
LIG3-205ENST00000585941 ZKSCAN5Q9Y2L8 839 aa16.12■□□□□ 0.17
LIG3-205ENST00000585941 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
LIG3-205ENST00000585941 PCDHA5Q9Y5H7 936 aa16.12■□□□□ 0.17
LIG3-205ENST00000585941 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.11■□□□□ 0.17
LIG3-205ENST00000585941 CLRN2A0PK11 232 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 AP5Z1O43299 807 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 MRPL12P52815 198 aaKnown RBP16.11■□□□□ 0.17
LIG3-205ENST00000585941 MCTP2Q6DN12 878 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 PLA2G4DQ86XP0 818 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 AOPEPQ8N6M6 819 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 EPSTI1Q96J88 318 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 CNTNAP1P78357 1384 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 F5H6K3 240 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 BIN1O00499 593 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 GH2P01242 217 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 CLCN1P35523 988 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 TNNI2P48788 182 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 ZNF75DP51815 510 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 KLRC3Q07444 240 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 CT47A1Q5JQC4 288 aaPredicted RBP16.11■□□□□ 0.17
LIG3-205ENST00000585941 USP49Q70CQ1 688 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 SIAH1Q8IUQ4 282 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 PDILTQ8N807 584 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 MLKLQ8NB16 471 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 SPATA20Q8TB22 786 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 CUL5Q93034 780 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 DHX58Q96C10 678 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 AK8Q96MA6 479 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 SGIP1Q9BQI5 828 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 ARHGEF10LQ9HCE6 1279 aa16.11■□□□□ 0.17
LIG3-205ENST00000585941 NFKBIEO00221 500 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 GDF11O95390 407 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 SARSP49591 514 aaKnown RBP16.1■□□□□ 0.17
LIG3-205ENST00000585941 TRAF1Q13077 416 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 R3HDM1Q15032 1099 aaKnown RBP16.1■□□□□ 0.17
LIG3-205ENST00000585941 TTBK2Q6IQ55 1244 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 SH3RF1Q7Z6J0 888 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 COA7Q96BR5 231 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 MRFAP1L1Q96HT8 127 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 NAP1L4Q99733 375 aaKnown RBP16.1■□□□□ 0.17
LIG3-205ENST00000585941 VEZTQ9HBM0 779 aa16.1■□□□□ 0.17
LIG3-205ENST00000585941 RRAGDQ9NQL2 400 aaPredicted RBP16.1■□□□□ 0.17
LIG3-205ENST00000585941 USP17L10C9JJH3 530 aa16.09■□□□□ 0.17
LIG3-205ENST00000585941 NEMFO60524 1076 aa16.09■□□□□ 0.17
LIG3-205ENST00000585941 SLURP2P0DP57 97 aa16.09■□□□□ 0.17
LIG3-205ENST00000585941 ZNF280AP59817 542 aaPredicted RBP16.09■□□□□ 0.17
LIG3-205ENST00000585941 TNFAIP1Q13829 316 aa16.09■□□□□ 0.17
LIG3-205ENST00000585941 MYOZ2Q9NPC6 264 aa16.09■□□□□ 0.17
LIG3-205ENST00000585941 PPP1R1BQ9UD71 204 aaPredicted RBP16.09■□□□□ 0.17
LIG3-205ENST00000585941 NDUFB10O96000 172 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 OR52Z1P0C646 297 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 SLC16A2P36021 539 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 LETM2Q2VYF4 491 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 BTNL9Q6UXG8 535 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 TBCKQ8TEA7 893 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 GSDMAQ96QA5 445 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 CCSER1Q9C0I3 900 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 SH2D4AQ9H788 454 aa16.08■□□□□ 0.17
LIG3-205ENST00000585941 BIN2Q9UBW5 565 aaPredicted RBP16.08■□□□□ 0.17
LIG3-205ENST00000585941 A0A087X0B3 334 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 WNT10BO00744 389 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 RAD21O60216 631 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 CCNT1O60563 726 aaKnown RBP16.08■□□□□ 0.16
LIG3-205ENST00000585941 BMP3P12645 472 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 MYL5Q02045 173 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 MAP3K10Q02779 954 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 MORC3Q14149 939 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 IL17AQ16552 155 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 JAKMIP3Q5VZ66 844 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 DPF2Q92785 391 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 PAGE5Q96GU1 130 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 PSTPIP2Q9H939 334 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 GOPCQ9HD26 462 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 MAN1B1Q9UKM7 699 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
LIG3-205ENST00000585941 A0A087WWV3 80 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 PPP1R11O60927 126 aaPredicted RBP16.07■□□□□ 0.16
LIG3-205ENST00000585941 UBA7P41226 1012 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 CLK2P49760 499 aaKnown RBP16.07■□□□□ 0.16
LIG3-205ENST00000585941 SEMA3FQ13275 785 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 E2F4Q16254 413 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
LIG3-205ENST00000585941 QRICH1Q2TAL8 776 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 TMEM60Q9H2L4 133 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 CUEDC2Q9H467 287 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 ZBTB21Q9ULJ3 1066 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 TMX2Q9Y320 296 aa16.07■□□□□ 0.16
LIG3-205ENST00000585941 FOXN1O15353 648 aa16.06■□□□□ 0.16
LIG3-205ENST00000585941 ZNF500O60304 480 aaPredicted RBP16.06■□□□□ 0.16
LIG3-205ENST00000585941 MYL1P05976 194 aa16.06■□□□□ 0.16
LIG3-205ENST00000585941 GCFC2P16383 781 aaKnown RBP16.06■□□□□ 0.16
LIG3-205ENST00000585941 SHROOM1Q2M3G4 852 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms