RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 TDO2P48775 406 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 CDK7P50613 346 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 GJA9P57773 515 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 GRIN2CQ14957 1233 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 CCDC144BQ3MJ40 725 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 CCSAPQ6IQ19 270 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 APPBP2Q92624 585 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 MKL1Q969V6 931 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.77□□□□□ -0.375e-22■■■□□ 14.7
CSNK1D-226ENST00000585026 SEZ6LQ9BYH1 1024 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 NACAP1Q9BZK3 213 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 UPF3AQ9H1J1 476 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 RWDD1Q9H446 243 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 SLC38A10Q9HBR0 1119 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 RAVER2Q9HCJ3 691 aaKnown RBP12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 RIPK3Q9Y572 518 aa12.77□□□□□ -0.37
CSNK1D-226ENST00000585026 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 ZEB2O60315 1214 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 CABYRO75952 493 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 TTLL1O95922 423 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 RAB30Q15771 203 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 ARMCX2Q7L311 632 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 KBTBD3Q8NAB2 608 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 GMCL1P1Q8NEA9 526 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 CHURC1Q8WUH1 139 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 MSRAQ9UJ68 235 aa12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 ISY1Q9ULR0 285 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-226ENST00000585026 SMCHD1A6NHR9 2005 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 ASB14A6NK59 587 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 RNF113AO15541 343 aaKnown RBP12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 IGHDP01880 384 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 CHGBP05060 677 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 BMP3P12645 472 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 TNFAIP2Q03169 654 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 PDE4BQ07343 736 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 TKFCQ3LXA3 575 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 TMEM240Q5SV17 173 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 FAM160B2Q86V87 743 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
CSNK1D-226ENST00000585026 IGKV6D-41A0A0C4DH26 115 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 MYADML2A6NDP7 307 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 GPAA1O43292 621 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 TSPY3P0CV98 308 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 TSPY8P0CW00 308 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 CSF2RAP15509 400 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 STAT2P52630 851 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 NKX3-2P78367 333 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 AKNAD1Q5T1N1 836 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 CCDC144CPQ8IYA2 1237 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 IL27Q8NEV9 243 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 ATXN2LQ8WWM7 1075 aaKnown RBP12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 IL23AQ9NPF7 189 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 MYH8P13535 1937 aa12.74□□□□□ -0.37
CSNK1D-226ENST00000585026 ZNFX1Q9P2E3 1918 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 TNFRSF10AO00220 468 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 FGBP02675 491 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 SLC1A4P43007 532 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 ZNF365Q70YC5 407 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 LRRC47Q8N1G4 583 aaKnown RBP12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 NEDD1Q8NHV4 660 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 HERVK_113Q902F9 699 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 PBX4Q9BYU1 374 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 SLC28A3Q9HAS3 691 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 HOMER2Q9NSB8 354 aa12.73□□□□□ -0.37
CSNK1D-226ENST00000585026 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 SMARCA5O60264 1052 aaPredicted RBP12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 PRDM1O75626 825 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 C16orf59Q7L2K0 433 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 IFNL3Q8IZI9 196 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 FAM133AQ8N9E0 248 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 PPM1EQ8WY54 764 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 GMCL1Q96IK5 515 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 NAPBQ9H115 298 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 HIPK3Q9H422 1215 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 DCTPP1Q9H773 170 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 RNF146Q9NTX7 359 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 THEGQ9P2T0 379 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 Q9Y3F1 56 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
CSNK1D-226ENST00000585026 DNAH12Q6ZR08 3092 aa12.71□□□□□ -0.37
CSNK1D-226ENST00000585026 GRXCR1A8MXD5 290 aa12.71□□□□□ -0.37
CSNK1D-226ENST00000585026 ERC2O15083 957 aa12.71□□□□□ -0.37
CSNK1D-226ENST00000585026 PLA2G6O60733 806 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms