RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 NCAPG2Q86XI2 1143 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 RAET1EQ8TD07 263 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 MAP3K14Q99558 947 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 TEX13BQ9BXU2 312 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 RBM28Q9NW13 759 aaKnown RBP16.11■□□□□ 0.17
TRAF4-215ENST00000584944 SEC63Q9UGP8 760 aaKnown RBP16.11■□□□□ 0.17
TRAF4-215ENST00000584944 PRR12Q9ULL5 1215 aa16.11■□□□□ 0.17
TRAF4-215ENST00000584944 MGAMO43451 1857 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 CPLX1O14810 134 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 RXRAP19793 462 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 MAPK4P31152 587 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 STAT3P40763 770 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 TROAPQ12815 778 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 TRAF1Q13077 416 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 PPP2R5BQ15173 497 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 RABEP1Q15276 862 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 SNRNP48Q6IEG0 339 aaKnown RBP16.1■□□□□ 0.17
TRAF4-215ENST00000584944 CPLX2Q6PUV4 134 aaKnown RBP16.1■□□□□ 0.17
TRAF4-215ENST00000584944 NOL8Q76FK4 1167 aaKnown RBP16.1■□□□□ 0.17
TRAF4-215ENST00000584944 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 FANCBQ8NB91 859 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 SPATC1LQ9H0A9 340 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 RBPJLQ9UBG7 517 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 MORF4L1Q9UBU8 362 aa16.1■□□□□ 0.17
TRAF4-215ENST00000584944 SLC25A27O95847 323 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 OAZ1P54368 228 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 AKAP17AQ02040 695 aaKnown RBP16.09■□□□□ 0.17
TRAF4-215ENST00000584944 PRKCZQ05513 592 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 IL27Q8NEV9 243 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 RRP36Q96EU6 259 aaKnown RBP16.09■□□□□ 0.17
TRAF4-215ENST00000584944 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 MROH8Q9H579 483 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 SLC38A10Q9HBR0 1119 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 RAVER2Q9HCJ3 691 aaKnown RBP16.09■□□□□ 0.17
TRAF4-215ENST00000584944 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 CCPG1Q9ULG6 757 aa16.09■□□□□ 0.17
TRAF4-215ENST00000584944 RCAN1P53805 252 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 BTNL9Q6UXG8 535 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 HOMER1Q86YM7 354 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 ADGRF4Q8IZF3 695 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 FBXL16Q8N461 479 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 PIBF1Q8WXW3 757 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 HOMER2Q9NSB8 354 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 BTBD7Q9P203 1132 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 BRPF3Q9ULD4 1205 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 GABRQQ9UN88 632 aa16.08■□□□□ 0.16
TRAF4-215ENST00000584944 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-215ENST00000584944 GJB1P08034 283 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 ALAS1P13196 640 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 CCL5P13501 91 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 GJA8P48165 433 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 AK2P54819 239 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 SNAP25P60880 206 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 STK3Q13188 491 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 COL9A3Q14050 684 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-215ENST00000584944 KCTD2Q14681 263 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 TMEM132BQ14DG7 1078 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-215ENST00000584944 STAG2Q8N3U4 1231 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 MOV10L1Q9BXT6 1211 aaKnown RBP16.07■□□□□ 0.16
TRAF4-215ENST00000584944 SLKQ9H2G2 1235 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-215ENST00000584944 CPVLQ9H3G5 476 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 SLC5A4Q9NY91 659 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
TRAF4-215ENST00000584944 DOCK3Q8IZD9 2030 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 PEX10O60683 326 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 CDKL5O76039 1030 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 ICAM1P05362 532 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 FCER1AP12319 257 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 ERCC3P19447 782 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 UBXN2AP68543 259 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 TOB2Q14106 344 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-215ENST00000584944 PLEKHH3Q7Z736 793 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 UBE2Q1Q7Z7E8 422 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 RIOX2Q8IUF8 465 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 SLAIN1Q8ND83 568 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 SHCBP1Q8NEM2 672 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 ZNF274Q96GC6 653 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-215ENST00000584944 LARP6Q9BRS8 491 aaKnown RBP16.06■□□□□ 0.16
TRAF4-215ENST00000584944 BIN2Q9UBW5 565 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-215ENST00000584944 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
TRAF4-215ENST00000584944 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-215ENST00000584944 H0YGN5 161 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 ZBTB5O15062 677 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 FLT3LGP49771 235 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 FXR1P51114 621 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRAF4-215ENST00000584944 CCT2P78371 535 aaKnown RBP16.05■□□□□ 0.16
TRAF4-215ENST00000584944 TKFCQ3LXA3 575 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 USH1GQ495M9 461 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 TRIM22Q8IYM9 498 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 ANKRD35Q8N283 1001 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 IL17RAQ96F46 866 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
TRAF4-215ENST00000584944 SPZ1Q9BXG8 430 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms