RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 DYNLL1P63167 89 aaKnown RBP14.26□□□□□ -0.13
ITGB4-212ENST00000584558 MECOMQ03112 1051 aa14.26□□□□□ -0.13
ITGB4-212ENST00000584558 RASGRP2Q7LDG7 609 aa14.26□□□□□ -0.13
ITGB4-212ENST00000584558 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
ITGB4-212ENST00000584558 SELENOOQ9BVL4 669 aa14.26□□□□□ -0.13
ITGB4-212ENST00000584558 GRIN2DO15399 1336 aa14.26□□□□□ -0.13
ITGB4-212ENST00000584558 TNS1Q9HBL0 1735 aaKnown RBP14.26□□□□□ -0.13
ITGB4-212ENST00000584558 ENC1O14682 589 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 CHUKO15111 745 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 LIFRP42702 1097 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 APOA5Q6Q788 366 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 AKT1S1Q96B36 256 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 CAPZA3Q96KX2 299 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 A1CFQ9NQ94 594 aaKnown RBP14.25□□□□□ -0.13
ITGB4-212ENST00000584558 MCM8Q9UJA3 840 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 ODF2LQ9ULJ1 636 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 XDHP47989 1333 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 BAZ2AQ9UIF9 1905 aaKnown RBP14.25□□□□□ -0.13
ITGB4-212ENST00000584558 ZNF18P17022 549 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
ITGB4-212ENST00000584558 PPARAQ07869 468 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 SLC39A14Q15043 492 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 SPECC1Q5M775 1068 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 TMED8Q6PL24 325 aaPredicted RBP14.25□□□□□ -0.13
ITGB4-212ENST00000584558 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 KRT23Q9C075 422 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 TTF2Q9UNY4 1162 aaKnown RBP14.25□□□□□ -0.13
ITGB4-212ENST00000584558 DLEC1Q9Y238 1755 aa14.25□□□□□ -0.13
ITGB4-212ENST00000584558 MYBL2P10244 700 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 MCM3P25205 808 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 FNTAP49354 379 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 NR1I3Q14994 352 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 MFSD6Q6ZSS7 791 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 TACO1Q9BSH4 297 aaKnown RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 NAA15Q9BXJ9 866 aaKnown RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 HDAC6Q9UBN7 1215 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 PRDX5P30044 214 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 CASP14P31944 242 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 GPSM2P81274 684 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 ACTN3Q08043 901 aaPredicted RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 SGSM3Q96HU1 749 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 MTA3Q9BTC8 594 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 FAM217BQ9NTX9 383 aaPredicted RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 RGPD3A6NKT7 1758 aaPredicted RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 RGPD4Q7Z3J3 1758 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 FRMD3A2A2Y4 597 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 SMIM22K7EJ46 135 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 KIF23Q02241 960 aaPredicted RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 R3HDM1Q15032 1099 aaKnown RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 RPGRQ92834 1020 aaKnown RBP14.24□□□□□ -0.13
ITGB4-212ENST00000584558 MMS19Q96T76 1030 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 MAN1B1Q9UKM7 699 aa14.24□□□□□ -0.13
ITGB4-212ENST00000584558 CPLX1O14810 134 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 SRGAP2O75044 1071 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 FGRP09769 529 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 RNF187Q5TA31 235 aaPredicted RBP14.23□□□□□ -0.13
ITGB4-212ENST00000584558 NAIF1Q69YI7 327 aaPredicted RBP14.23□□□□□ -0.13
ITGB4-212ENST00000584558 CEP57Q86XR8 500 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 CEP120Q8N960 986 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 RNF217Q8TC41 542 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 ANKIB1Q9P2G1 1089 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 GUCA1BQ9UMX6 200 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 MFAP3LO75121 409 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 AMPD2Q01433 879 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 PDCLQ13371 301 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 NTRK3Q16288 839 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 B4GALNT4Q76KP1 1039 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 IQCA1Q86XH1 822 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 JMYQ8N9B5 988 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 RBM17Q96I25 401 aaKnown RBP14.23□□□□□ -0.13
ITGB4-212ENST00000584558 FAXDC2Q96IV6 333 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 KCNH3Q9ULD8 1083 aa14.23□□□□□ -0.13
ITGB4-212ENST00000584558 MEFVO15553 781 aaPredicted RBP14.22□□□□□ -0.13
ITGB4-212ENST00000584558 HMGB2P26583 209 aaKnown RBP14.22□□□□□ -0.13
ITGB4-212ENST00000584558 SLC15A2Q16348 729 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 TMEM67Q5HYA8 995 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 SLF1Q9BQI6 1058 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 POLD4Q9HCU8 107 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 A0A1B0GTH6 734 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 ZEB2O60315 1214 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 FSBPO95073 299 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 ZBTB7AO95365 584 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 GCFC2P16383 781 aaKnown RBP14.22□□□□□ -0.13
ITGB4-212ENST00000584558 METAP2P50579 478 aaKnown RBP eCLIP14.22□□□□□ -0.13
ITGB4-212ENST00000584558 BIRC2Q13490 618 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 PREPLQ4J6C6 727 aaPredicted RBP14.22□□□□□ -0.13
ITGB4-212ENST00000584558 ENOX1Q8TC92 643 aaKnown RBP14.22□□□□□ -0.13
ITGB4-212ENST00000584558 CRAMP1Q96RY5 1269 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 RNF41Q9H4P4 317 aaPredicted RBP14.22□□□□□ -0.13
ITGB4-212ENST00000584558 KLC4Q9NSK0 619 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 TRIM10Q9UDY6 481 aa14.22□□□□□ -0.13
ITGB4-212ENST00000584558 MYH8P13535 1937 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 CEP85LQ5SZL2 805 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 KLHL10Q6JEL2 608 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 IFIT3O14879 490 aaKnown RBP14.21□□□□□ -0.13
ITGB4-212ENST00000584558 ARHGAP25P42331 645 aa14.21□□□□□ -0.13
ITGB4-212ENST00000584558 FXR1P51114 621 aaKnown RBP eCLIP14.21□□□□□ -0.13
ITGB4-212ENST00000584558 STX17P56962 302 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms