RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 ABCF2Q9UG63 623 aa11.35□□□□□ -0.59
CDH8-211ENST00000584337 SPDYE3A6NKU9 549 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 FOXN1O15353 648 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 PARP1P09874 1014 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 MTIF2P46199 727 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 MAGOHP61326 146 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 MAP3K12Q12852 859 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 GRAMD1CQ8IYS0 662 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 HDAC7Q8WUI4 952 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 RAPGEF5Q92565 580 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 MAGOHBQ96A72 148 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 DISP1Q96F81 1524 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 KCNJ18B7U540 433 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 TRAPPC3O43617 180 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 RNF8O76064 485 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 SKIP12755 728 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 HAND2P61296 217 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 KCNJ12Q14500 433 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 SETDB1Q15047 1291 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 TDRD12Q587J7 1177 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 INTS8Q75QN2 995 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 TRPM8Q7Z2W7 1104 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 VSIG1Q86XK7 387 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 TRIM47Q96LD4 638 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 NOX5Q96PH1 765 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 STMN4Q9H169 189 aaPredicted RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 INTS9Q9NV88 658 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 LARSQ9P2J5 1176 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 CTDNEP1O95476 244 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 DDX58O95786 925 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 MAGEA1P43355 309 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 EDC3Q96F86 508 aaKnown RBP11.34□□□□□ -0.59
CDH8-211ENST00000584337 LMCD1Q9NZU5 365 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 CD2APQ9Y5K6 639 aa11.34□□□□□ -0.59
CDH8-211ENST00000584337 MROH7-TTC4A0A0A0MT08 1334 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 ABL1P00519 1130 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 CYP27A1Q02318 531 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 PAK1Q13153 545 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 KRT31Q15323 416 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 ZMYM1Q5SVZ6 1142 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 ARHGAP18Q8N392 663 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 ABTB1Q969K4 478 aaPredicted RBP11.33□□□□□ -0.6
CDH8-211ENST00000584337 EAF2Q96CJ1 260 aaPredicted RBP11.33□□□□□ -0.6
CDH8-211ENST00000584337 RNF14Q9UBS8 474 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 ITIH6Q6UXX5 1313 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 USP42Q9H9J4 1324 aaKnown RBP11.33□□□□□ -0.6
CDH8-211ENST00000584337 ZFYP08048 801 aaPredicted RBP11.33□□□□□ -0.6
CDH8-211ENST00000584337 XBP1P17861 261 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 MORC3Q14149 939 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 C6orf89Q6UWU4 347 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 PHAXQ9H814 394 aaKnown RBP11.33□□□□□ -0.6
CDH8-211ENST00000584337 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDH8-211ENST00000584337 ATP10BO94823 1461 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 DPPA5A6NC42 116 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 E7EWF7 191 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDH8-211ENST00000584337 ATP6V1G1O75348 118 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 CDC27P30260 824 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 APBB1IPQ7Z5R6 666 aaPredicted RBP11.33□□□□□ -0.6
CDH8-211ENST00000584337 GJB4Q9NTQ9 266 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 RMND1Q9NWS8 449 aa11.33□□□□□ -0.6
CDH8-211ENST00000584337 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
CDH8-211ENST00000584337 FOXO3O43524 673 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 MMEP08473 750 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 IFNAR2P48551 515 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
CDH8-211ENST00000584337 LCA5Q86VQ0 697 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 NCAPG2Q86XI2 1143 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 ZNF233A6NK53 670 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 HNRNPCP07910 306 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDH8-211ENST00000584337 MYL6BP14649 208 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 SESN3P58005 492 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
CDH8-211ENST00000584337 CDC37Q16543 378 aaPredicted RBP11.32□□□□□ -0.6
CDH8-211ENST00000584337 MTHFD1LQ6UB35 978 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 LRIG3Q6UXM1 1119 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 MAEAQ7L5Y9 396 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 MICU3Q86XE3 530 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 ZFAND2BQ8WV99 257 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 PLCB1Q9NQ66 1216 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 IQGAP3Q86VI3 1631 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 hCG_2014768A0A024R1R8 64 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 PDE2AO00408 941 aaPredicted RBP11.32□□□□□ -0.6
CDH8-211ENST00000584337 FMNL1O95466 1100 aaPredicted RBP11.32□□□□□ -0.6
CDH8-211ENST00000584337 SCNN1BP51168 640 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 Q4G0T1 1027 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 NCOA7Q8NI08 942 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 PLEKHG4BQ96PX9 1271 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 XPO6Q96QU8 1125 aaKnown RBP11.32□□□□□ -0.6
CDH8-211ENST00000584337 TMBIM4Q9HC24 238 aa11.32□□□□□ -0.6
CDH8-211ENST00000584337 DDX21Q9NR30 783 aaKnown RBP eCLIP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms