RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 KCTD1Q719H9 257 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 CLEC10AQ8IUN9 316 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 PHF20Q9BVI0 1012 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 ZMYND12Q9H0C1 365 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 RANBP17Q9H2T7 1088 aaKnown RBP10.6□□□□□ -0.71
CASC3-209ENST00000583902 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 GPCPD1Q9NPB8 672 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 CFAP45Q9UL16 551 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
CASC3-209ENST00000583902 SCAF8Q9UPN6 1271 aaKnown RBP10.6□□□□□ -0.71
CASC3-209ENST00000583902 PARP14Q460N5 1801 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 VPS37CA5D8V6 355 aaPredicted RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 KIF3CO14782 793 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 ZBED4O75132 1171 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 BMP15O95972 392 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 POTEJP0CG39 1038 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 GOLGA8HP0CJ92 632 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 KRT2P35908 639 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 TRAPPC10P48553 1259 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 ORC2Q13416 577 aaPredicted RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 CDC37Q16543 378 aaPredicted RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 CATSPERGQ6ZRH7 1159 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 RAB11FIP4Q86YS3 637 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 CCDC102AQ96A19 550 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 ZNF396Q96N95 335 aaPredicted RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 SCAND2PQ9GZW5 306 aaPredicted RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 PPP1R9AQ9ULJ8 1098 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 ADAMTS5Q9UNA0 930 aa10.59□□□□□ -0.71
CASC3-209ENST00000583902 MRPL11Q9Y3B7 192 aaKnown RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 MORC2Q9Y6X9 1032 aaPredicted RBP10.59□□□□□ -0.71
CASC3-209ENST00000583902 ABCB11O95342 1321 aa10.58□□□□□ -0.71
CASC3-209ENST00000583902 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.71
CASC3-209ENST00000583902 IRF6O14896 467 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 FLOT1O75955 427 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 FOSP01100 380 aaPredicted RBP10.58□□□□□ -0.72
CASC3-209ENST00000583902 ICAM1P05362 532 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 OSBPP22059 807 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 HMGCS2P54868 508 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 NLRP5P59047 1200 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 KRT85P78386 507 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 PRKG1Q13976 671 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 SHROOM1Q2M3G4 852 aaPredicted RBP10.58□□□□□ -0.72
CASC3-209ENST00000583902 RILPL1Q5EBL4 403 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 FBXO11Q86XK2 927 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 MCF2L2Q86YR7 1114 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 CCDC82Q8N4S0 544 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 CUL5Q93034 780 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 OPTNQ96CV9 577 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 PIGSQ96S52 555 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 NAP1L4Q99733 375 aaKnown RBP10.58□□□□□ -0.72
CASC3-209ENST00000583902 TANGO6Q9C0B7 1094 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 RPAP3Q9H6T3 665 aaPredicted RBP10.58□□□□□ -0.72
CASC3-209ENST00000583902 ELP3Q9H9T3 547 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
CASC3-209ENST00000583902 PCDHA4Q9UN74 947 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 AGTPBP1Q9UPW5 1226 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 RABGAP1Q9Y3P9 1069 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 PCDHB13Q9Y5F0 798 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 MYH15Q9Y2K3 1946 aa10.58□□□□□ -0.72
CASC3-209ENST00000583902 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 UBE2Q2LH0YL09 131 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 STXBP3O00186 592 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 PIK3CDO00329 1044 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 TIE1P35590 1138 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 NAPAP54920 295 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 AP3B2Q13367 1082 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 QRICH1Q2TAL8 776 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 WWC2Q6AWC2 1192 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 OTUD7BQ6GQQ9 843 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 TTBK2Q6IQ55 1244 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 KRT25Q7Z3Z0 450 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 HEATR3Q7Z4Q2 680 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 NOSTRINQ8IVI9 506 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 BLIDQ8IZY5 108 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 SPICE1Q8N0Z3 855 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 ZNF526Q8TF50 670 aaPredicted RBP10.57□□□□□ -0.72
CASC3-209ENST00000583902 SPOCK2Q92563 424 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 OTUD5Q96G74 571 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 UBA5Q9GZZ9 404 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 ZNF408Q9H9D4 720 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 SLC38A10Q9HBR0 1119 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 RIC8AQ9NPQ8 531 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 NOL7Q9UMY1 257 aaKnown RBP10.57□□□□□ -0.72
CASC3-209ENST00000583902 CEP131Q9UPN4 1083 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 PCDHA1Q9Y5I3 950 aa10.57□□□□□ -0.72
CASC3-209ENST00000583902 TCHHQ07283 1943 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 RLFQ13129 1914 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 UTRNP46939 3433 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 SMCO2A6NFE2 343 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 MANSC4A6NHS7 340 aaPredicted RBP10.56□□□□□ -0.72
CASC3-209ENST00000583902 TMEM88BA6NKF7 163 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 TRAF5O00463 557 aa10.56□□□□□ -0.72
CASC3-209ENST00000583902 VWA5AO00534 786 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms