RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 CHD7Q9P2D1 2997 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 A0A0U1RQG5 324 aaPredicted RBP16.19■□□□□ 0.18
SS18-222ENST00000582792 ARVCFO00192 962 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 SMARCA5O60264 1052 aaPredicted RBP16.19■□□□□ 0.18
SS18-222ENST00000582792 OAZ1P54368 228 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 TMEM240Q5SV17 173 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 RASIP1Q5U651 963 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 C16orf59Q7L2K0 433 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 ARMCX2Q7L311 632 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 KBTBD3Q8NAB2 608 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 USP38Q8NB14 1042 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 APPBP2Q92624 585 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 OSBP2Q969R2 916 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 PRDM6Q9NQX0 595 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
SS18-222ENST00000582792 GNASQ5JWF2 1037 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 FAM126BQ8IXS8 530 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 ZNF444Q8N0Y2 327 aaPredicted RBP16.18■□□□□ 0.18
SS18-222ENST00000582792 TMEM199Q8N511 208 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 CEP95Q96GE4 821 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 ZNF287Q9HBT7 754 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 EPB41L4AQ9HCS5 686 aaPredicted RBP16.18■□□□□ 0.18
SS18-222ENST00000582792 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
SS18-222ENST00000582792 GPAA1O43292 621 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 TTLL1O95922 423 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 CSF2RAP15509 400 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 GNAT2P19087 354 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 RRP1P56182 461 aaKnown RBP16.17■□□□□ 0.18
SS18-222ENST00000582792 NKX3-2P78367 333 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 TJAP1Q5JTD0 557 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 CCDC144CPQ8IYA2 1237 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 PBX4Q9BYU1 374 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 KATNBL1Q9H079 304 aa16.17■□□□□ 0.18
SS18-222ENST00000582792 CTAGE5O15320 804 aa16.16■□□□□ 0.18
SS18-222ENST00000582792 TLR3O15455 904 aaKnown RBP16.16■□□□□ 0.18
SS18-222ENST00000582792 RNF113AO15541 343 aaKnown RBP16.16■□□□□ 0.18
SS18-222ENST00000582792 PRDM1O75626 825 aa16.16■□□□□ 0.18
SS18-222ENST00000582792 ZFYP08048 801 aaPredicted RBP16.16■□□□□ 0.18
SS18-222ENST00000582792 FDX1P10109 184 aa16.16■□□□□ 0.18
SS18-222ENST00000582792 PBX2P40425 430 aa16.16■□□□□ 0.18
SS18-222ENST00000582792 TDO2P48775 406 aa16.16■□□□□ 0.18
SS18-222ENST00000582792 PSRC1Q6PGN9 363 aaPredicted RBP16.16■□□□□ 0.18
SS18-222ENST00000582792 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
SS18-222ENST00000582792 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
SS18-222ENST00000582792 PLIN4Q96Q06 1357 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 GRXCR1A8MXD5 290 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 CD4P01730 458 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 BMP3P12645 472 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 CNTN2Q02246 1040 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 SLFN13Q68D06 897 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 CCDC129Q6ZRS4 1044 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 ZNF365Q70YC5 407 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 FAM133AQ8N9E0 248 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 GPATCH3Q96I76 525 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 GAS2L1Q99501 681 aaPredicted RBP16.15■□□□□ 0.18
SS18-222ENST00000582792 ACAD9Q9H845 621 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
SS18-222ENST00000582792 REV3LO60673 3130 aa16.14■□□□□ 0.18
SS18-222ENST00000582792 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.14■□□□□ 0.17
SS18-222ENST00000582792 PATL2C9JE40 543 aaKnown RBP16.14■□□□□ 0.17
SS18-222ENST00000582792 M0R2C6 588 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 APPP05067 770 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 ACRP10323 421 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 BEX3Q00994 111 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 TNFAIP2Q03169 654 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 IL23AQ9NPF7 189 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 A1CFQ9NQ94 594 aaKnown RBP16.14■□□□□ 0.17
SS18-222ENST00000582792 ASTN1O14525 1302 aa16.14■□□□□ 0.17
SS18-222ENST00000582792 TRANK1O15050 2925 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 TMEM232C9JQI7 657 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 CABYRO75952 493 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 STAT2P52630 851 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 AKNAD1Q5T1N1 836 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 TSHZ3Q63HK5 1081 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 HERVK_113Q902F9 699 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 GMCL1Q96IK5 515 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 PRDM12Q9H4Q4 367 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 RNF146Q9NTX7 359 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 GNEQ9Y223 722 aaKnown RBP16.13■□□□□ 0.17
SS18-222ENST00000582792 LRRC37A2A6NM11 1700 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 ZNF536O15090 1300 aa16.13■□□□□ 0.17
SS18-222ENST00000582792 SOWAHBA6NEL2 793 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 ASB14A6NK59 587 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 CYP2C18P33260 490 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 PDE4BQ07343 736 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 RAB30Q15771 203 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 TKFCQ3LXA3 575 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 CXCL17Q6UXB2 119 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 NOL8Q76FK4 1167 aaKnown RBP16.12■□□□□ 0.17
SS18-222ENST00000582792 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 FAM160B2Q86V87 743 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 CHURC1Q8WUH1 139 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms