RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 GUCD1Q96NT3 240 aa17.16■□□□□ 0.34
ITGB4-208ENST00000582629 ACAD9Q9H845 621 aa17.16■□□□□ 0.34
ITGB4-208ENST00000582629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
ITGB4-208ENST00000582629 TSPY2A6NKD2 308 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 PLA2G6O60733 806 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 RAG1P15918 1043 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 ITGB8P26012 769 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 CST5P28325 142 aaPredicted RBP17.15■□□□□ 0.34
ITGB4-208ENST00000582629 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
ITGB4-208ENST00000582629 IKQ13123 557 aaPredicted RBP17.15■□□□□ 0.34
ITGB4-208ENST00000582629 KCNA10Q16322 511 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 CCSAPQ6IQ19 270 aaPredicted RBP17.15■□□□□ 0.34
ITGB4-208ENST00000582629 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 ANKRD33Q7Z3H0 272 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 PCSK9Q8NBP7 692 aaKnown RBP17.15■□□□□ 0.34
ITGB4-208ENST00000582629 SPC25Q9HBM1 224 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 HOMER2Q9NSB8 354 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 TMEM39AQ9NV64 488 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 STX8Q9UNK0 236 aa17.15■□□□□ 0.34
ITGB4-208ENST00000582629 MYADML2A6NDP7 307 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 DCDC2CA8MYV0 355 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 FOXP2O15409 715 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 C6orf222P0C671 652 aaPredicted RBP17.14■□□□□ 0.33
ITGB4-208ENST00000582629 MCCP23508 829 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 SMAD3P84022 425 aaKnown RBP17.14■□□□□ 0.33
ITGB4-208ENST00000582629 CTDSPL2Q05D32 466 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 CCDC144BQ3MJ40 725 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 CCDC144CPQ8IYA2 1237 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 EVI5LQ96CN4 794 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 GLT1D1Q96MS3 346 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 FAM161BQ96MY7 647 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
ITGB4-208ENST00000582629 RNF146Q9NTX7 359 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 ZNF536O15090 1300 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 ELP1O95163 1332 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 MROH7Q68CQ1 1323 aa17.14■□□□□ 0.33
ITGB4-208ENST00000582629 ADCY6O43306 1168 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 GJA9P57773 515 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 FAAP100Q0VG06 881 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 RCSD1Q6JBY9 416 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 FAM133AQ8N9E0 248 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 AGBL1Q96MI9 1066 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 KATNBL1Q9H079 304 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 A1CFQ9NQ94 594 aaKnown RBP17.13■□□□□ 0.33
ITGB4-208ENST00000582629 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 HELLSQ9NRZ9 838 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
ITGB4-208ENST00000582629 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
ITGB4-208ENST00000582629 ASGR1P07306 291 aa17.12■□□□□ 0.33
ITGB4-208ENST00000582629 FPGSQ05932 587 aa17.12■□□□□ 0.33
ITGB4-208ENST00000582629 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
ITGB4-208ENST00000582629 KCTD1Q719H9 257 aa17.12■□□□□ 0.33
ITGB4-208ENST00000582629 RNPC3Q96LT9 517 aaKnown RBP17.12■□□□□ 0.33
ITGB4-208ENST00000582629 TRERF1Q96PN7 1200 aa17.12■□□□□ 0.33
ITGB4-208ENST00000582629 INCENPQ9NQS7 918 aa17.12■□□□□ 0.33
ITGB4-208ENST00000582629 LRRC37A2A6NM11 1700 aa17.12■□□□□ 0.33
ITGB4-208ENST00000582629 ASB14A6NK59 587 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 ORC4O43929 436 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 NMT2O60551 498 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 ALAS1P13196 640 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 NOVP48745 357 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 PDE1AP54750 535 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 EPHB4P54760 987 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 ALX1Q15699 326 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 CCDC174Q6PII3 467 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 CRBNQ96SW2 442 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 SEMA6BQ9H3T3 888 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 PRR12Q9ULL5 1215 aa17.11■□□□□ 0.33
ITGB4-208ENST00000582629 LAMA2P24043 3122 aaKnown RBP17.11■□□□□ 0.33
ITGB4-208ENST00000582629 A0A0U1RQG5 324 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-208ENST00000582629 SOWAHBA6NEL2 793 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 TIMP1P01033 207 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 FGRP09769 529 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 CDK7P50613 346 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 NKX3-2P78367 333 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 IRX5P78411 483 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-208ENST00000582629 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-208ENST00000582629 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 TICAM2Q86XR7 235 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 TBX21Q9UL17 535 aa17.1■□□□□ 0.33
ITGB4-208ENST00000582629 ARVCFO00192 962 aa17.09■□□□□ 0.33
ITGB4-208ENST00000582629 TNFAIP2Q03169 654 aa17.09■□□□□ 0.33
ITGB4-208ENST00000582629 CCDC96Q2M329 555 aa17.09■□□□□ 0.33
ITGB4-208ENST00000582629 RASGRP2Q7LDG7 609 aa17.09■□□□□ 0.33
ITGB4-208ENST00000582629 CDX2Q99626 313 aaPredicted RBP17.09■□□□□ 0.33
ITGB4-208ENST00000582629 TOMM22Q9NS69 142 aa17.09■□□□□ 0.33
ITGB4-208ENST00000582629 MTMR7Q9Y216 660 aa17.09■□□□□ 0.33
ITGB4-208ENST00000582629 LCTP09848 1927 aa17.09■□□□□ 0.33
ITGB4-208ENST00000582629 CDH23Q9H251 3354 aa17.08■□□□□ 0.33
ITGB4-208ENST00000582629 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.08■□□□□ 0.32
ITGB4-208ENST00000582629 CTAGE5O15320 804 aa17.08■□□□□ 0.32
ITGB4-208ENST00000582629 SNAP25P60880 206 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms