RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 RRP12Q5JTH9 1297 aaKnown RBP26.36■■□□□ 1.81
CASC3-207ENST00000581849 C1orf53Q5VUE5 145 aa26.36■■□□□ 1.81
CASC3-207ENST00000581849 KCTD1Q719H9 257 aa26.36■■□□□ 1.81
CASC3-207ENST00000581849 RNF180Q86T96 592 aa26.36■■□□□ 1.81
CASC3-207ENST00000581849 PRR12Q9ULL5 1215 aa26.36■■□□□ 1.81
CASC3-207ENST00000581849 SNAI1O95863 264 aaPredicted RBP26.35■■□□□ 1.81
CASC3-207ENST00000581849 TAL1P17542 331 aaPredicted RBP26.35■■□□□ 1.81
CASC3-207ENST00000581849 BTNL9Q6UXG8 535 aa26.35■■□□□ 1.81
CASC3-207ENST00000581849 SLC39A5Q6ZMH5 540 aa26.35■■□□□ 1.81
CASC3-207ENST00000581849 TMEM47Q9BQJ4 181 aa26.35■■□□□ 1.81
CASC3-207ENST00000581849 RNF146Q9NTX7 359 aa26.35■■□□□ 1.81
CASC3-207ENST00000581849 PHF24Q9UPV7 400 aa26.35■■□□□ 1.81
CASC3-207ENST00000581849 ATN1P54259 1190 aaPredicted RBP26.34■■□□□ 1.81
CASC3-207ENST00000581849 RTP1P59025 263 aa26.34■■□□□ 1.81
CASC3-207ENST00000581849 HAND2P61296 217 aa26.34■■□□□ 1.81
CASC3-207ENST00000581849 CWC27Q6UX04 472 aaKnown RBP26.34■■□□□ 1.81
CASC3-207ENST00000581849 TBC1D10CQ8IV04 446 aa26.34■■□□□ 1.81
CASC3-207ENST00000581849 FGD4Q96M96 766 aa26.34■■□□□ 1.81
CASC3-207ENST00000581849 ABHD16BQ9H3Z7 469 aa26.34■■□□□ 1.81
CASC3-207ENST00000581849 FAM184BQ9ULE4 1060 aa26.34■■□□□ 1.81
CASC3-207ENST00000581849 DNAH12Q6ZR08 3092 aa26.33■■□□□ 1.81
CASC3-207ENST00000581849 ZNF213O14771 459 aa26.33■■□□□ 1.81
CASC3-207ENST00000581849 CCDC96Q2M329 555 aa26.33■■□□□ 1.81
CASC3-207ENST00000581849 FAM133AQ8N9E0 248 aa26.33■■□□□ 1.81
CASC3-207ENST00000581849 ESR2Q92731 530 aa26.33■■□□□ 1.81
CASC3-207ENST00000581849 AGBL1Q96MI9 1066 aa26.33■■□□□ 1.81
CASC3-207ENST00000581849 DSCC1Q9BVC3 393 aa26.33■■□□□ 1.81
CASC3-207ENST00000581849 A1CFQ9NQ94 594 aaKnown RBP26.33■■□□□ 1.81
CASC3-207ENST00000581849 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.33■■□□□ 1.81
CASC3-207ENST00000581849 ADCYAP1R1P41586 468 aa26.32■■□□□ 1.8
CASC3-207ENST00000581849 TSEN34Q9BSV6 310 aaKnown RBP26.32■■□□□ 1.8
CASC3-207ENST00000581849 RANBP17Q9H2T7 1088 aaKnown RBP26.32■■□□□ 1.8
CASC3-207ENST00000581849 HOMER2Q9NSB8 354 aa26.32■■□□□ 1.8
CASC3-207ENST00000581849 PNMA2Q9UL42 364 aa26.32■■□□□ 1.8
CASC3-207ENST00000581849 POTEB2H3BUK9 544 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 ADAMTS4O75173 837 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 DUSP11O75319 330 aaKnown RBP26.31■■□□□ 1.8
CASC3-207ENST00000581849 ICAM1P05362 532 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 ACVR2BQ13705 512 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 CCDC178Q5BJE1 867 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 TDHQ8IZJ6 230 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 TRERF1Q96PN7 1200 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 UBE2OQ9C0C9 1292 aaKnown RBP26.31■■□□□ 1.8
CASC3-207ENST00000581849 PRKAG2Q9UGJ0 569 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 ZHX1Q9UKY1 873 aaPredicted RBP26.31■■□□□ 1.8
CASC3-207ENST00000581849 MCM3APO60318 1980 aa26.31■■□□□ 1.8
CASC3-207ENST00000581849 PGK1P00558 417 aa26.3■■□□□ 1.8
CASC3-207ENST00000581849 MYCNP04198 464 aaPredicted RBP26.3■■□□□ 1.8
CASC3-207ENST00000581849 ALAS1P13196 640 aa26.3■■□□□ 1.8
CASC3-207ENST00000581849 LRIT3Q3SXY7 679 aa26.3■■□□□ 1.8
CASC3-207ENST00000581849 ARMCX2Q7L311 632 aa26.3■■□□□ 1.8
CASC3-207ENST00000581849 RASGRP2Q7LDG7 609 aa26.3■■□□□ 1.8
CASC3-207ENST00000581849 DGKHQ86XP1 1220 aa26.3■■□□□ 1.8
CASC3-207ENST00000581849 CTNNA3Q9UI47 895 aa26.3■■□□□ 1.8
CASC3-207ENST00000581849 SNHG28P0DPA3 235 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 PDHBP11177 359 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 SYDE2Q5VT97 1194 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 GPR153Q6NV75 609 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 CCDC174Q6PII3 467 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 LBHD1Q9BQE6 289 aaPredicted RBP26.29■■□□□ 1.8
CASC3-207ENST00000581849 CCPG1Q9ULG6 757 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 ATP11BQ9Y2G3 1177 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 NEDD4P46934 1319 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 SYNRGQ9UMZ2 1314 aa26.29■■□□□ 1.8
CASC3-207ENST00000581849 MOXD2PA6NHM9 499 aa26.28■■□□□ 1.8
CASC3-207ENST00000581849 ASB14A6NK59 587 aa26.28■■□□□ 1.8
CASC3-207ENST00000581849 CST5P28325 142 aaPredicted RBP26.28■■□□□ 1.8
CASC3-207ENST00000581849 KLHDC9Q8NEP7 349 aa26.28■■□□□ 1.8
CASC3-207ENST00000581849 CHMP4CQ96CF2 233 aa26.28■■□□□ 1.8
CASC3-207ENST00000581849 MTMR7Q9Y216 660 aa26.28■■□□□ 1.8
CASC3-207ENST00000581849 LTBP2Q14767 1821 aa26.28■■□□□ 1.8
CASC3-207ENST00000581849 PDE4AP27815 886 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 ZNF543Q08ER8 600 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 IMMTQ16891 758 aaKnown RBP26.27■■□□□ 1.8
CASC3-207ENST00000581849 TRIM60Q495X7 471 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 TTC22Q5TAA0 569 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 TTBK2Q6IQ55 1244 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 IQCA1Q86XH1 822 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 CCDC144CPQ8IYA2 1237 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 FERMT2Q96AC1 680 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 KATNBL1Q9H079 304 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 RAD50Q92878 1312 aa26.27■■□□□ 1.8
CASC3-207ENST00000581849 A0A1W2PQ45 241 aaPredicted RBP26.26■■□□□ 1.79
CASC3-207ENST00000581849 A0A1W2PQY0 241 aa26.26■■□□□ 1.79
CASC3-207ENST00000581849 CNTN2Q02246 1040 aa26.26■■□□□ 1.79
CASC3-207ENST00000581849 GPATCH4Q5T3I0 446 aaKnown RBP26.26■■□□□ 1.79
CASC3-207ENST00000581849 ANKS1AQ92625 1134 aa26.26■■□□□ 1.79
CASC3-207ENST00000581849 LENG1Q96BZ8 264 aaPredicted RBP26.26■■□□□ 1.79
CASC3-207ENST00000581849 UPF3AQ9H1J1 476 aaKnown RBP26.26■■□□□ 1.79
CASC3-207ENST00000581849 SPC25Q9HBM1 224 aa26.26■■□□□ 1.79
CASC3-207ENST00000581849 CYP39A1Q9NYL5 469 aa26.26■■□□□ 1.79
CASC3-207ENST00000581849 LAMA3Q16787 3333 aa26.26■■□□□ 1.79
CASC3-207ENST00000581849 SZT2Q5T011 3432 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 LOC102724159A0A0B4J2E5 919 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 SOWAHBA6NEL2 793 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 SOX1O00570 391 aaPredicted RBP26.25■■□□□ 1.79
CASC3-207ENST00000581849 SLC16A2P36021 539 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 NKX3-2P78367 333 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 MDM2Q00987 491 aaPredicted RBP26.25■■□□□ 1.79
CASC3-207ENST00000581849 PWP2Q15269 919 aaKnown RBP26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms