RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 PCDHA6Q9UN73 950 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 HPSEQ9Y251 543 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 PCDHA8Q9Y5H6 950 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 SRPRBQ9Y5M8 271 aaKnown RBP16.72■□□□□ 0.27
MKS1-211ENST00000581761 MRVI1Q9Y6F6 885 aa16.72■□□□□ 0.27
MKS1-211ENST00000581761 SMCO2A6NFE2 343 aa16.71■□□□□ 0.27
MKS1-211ENST00000581761 TNNI2P48788 182 aa16.71■□□□□ 0.27
MKS1-211ENST00000581761 RRP1BQ14684 758 aaKnown RBP16.71■□□□□ 0.27
MKS1-211ENST00000581761 TTBK2Q6IQ55 1244 aa16.71■□□□□ 0.27
MKS1-211ENST00000581761 KCTD1Q719H9 257 aa16.71■□□□□ 0.27
MKS1-211ENST00000581761 TMEM39BQ9GZU3 492 aa16.71■□□□□ 0.27
MKS1-211ENST00000581761 SCAF8Q9UPN6 1271 aaKnown RBP16.71■□□□□ 0.27
MKS1-211ENST00000581761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.7■□□□□ 0.26
MKS1-211ENST00000581761 TMEM88BA6NKF7 163 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 M0R2N6 131 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 WNT7AO00755 349 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 GNA11P29992 359 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 SLC1A4P43007 532 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 JAG1P78504 1218 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 GRIN1Q05586 938 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 ANO6Q4KMQ2 910 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 ANGEL2Q5VTE6 544 aaKnown RBP16.7■□□□□ 0.26
MKS1-211ENST00000581761 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
MKS1-211ENST00000581761 TIGD1Q96MW7 591 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 ZMYND12Q9H0C1 365 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 JMJD4Q9H9V9 463 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 GGA3Q9NZ52 723 aa16.7■□□□□ 0.26
MKS1-211ENST00000581761 PNMA6FA0A0J9YX94 578 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 ESYT2A0FGR8 921 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 SLC16A2P36021 539 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 STX1AQ16623 288 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 SPECC1Q5M775 1068 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 PPP1R18Q6NYC8 613 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 KRT25Q7Z3Z0 450 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 FAM200AQ8TCP9 573 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 FERMT2Q96AC1 680 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 KCNH3Q9ULD8 1083 aa16.69■□□□□ 0.26
MKS1-211ENST00000581761 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 ADM5C9JUS6 153 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 TBC1D12O60347 775 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 ATP2C1P98194 919 aaPredicted RBP16.68■□□□□ 0.26
MKS1-211ENST00000581761 CDAN1Q8IWY9 1227 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 GMCL1P1Q8NEA9 526 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 COA7Q96BR5 231 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 CSRNP2Q9H175 543 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 ARHGEF10LQ9HCE6 1279 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 ZBTB21Q9ULJ3 1066 aa16.68■□□□□ 0.26
MKS1-211ENST00000581761 F5H6K3 240 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 NDUFB10O96000 172 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 MCM7P33993 719 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 ADCY7P51828 1080 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 KLRC3Q07444 240 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 PTGDRQ13258 359 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 INF2Q27J81 1249 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 CST9Q5W186 159 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 MIGA2Q7L4E1 593 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 KRT26Q7Z3Y9 468 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 DCPSQ96C86 337 aaKnown RBP16.67■□□□□ 0.26
MKS1-211ENST00000581761 MTMR8Q96EF0 704 aa16.67■□□□□ 0.26
MKS1-211ENST00000581761 ZBTB5O15062 677 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 TNFAIP1Q13829 316 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 RASA3Q14644 834 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 NONOQ15233 471 aaKnown RBP eCLIP16.66■□□□□ 0.26
MKS1-211ENST00000581761 KRBA2Q6ZNG9 492 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
MKS1-211ENST00000581761 ERCC4Q92889 916 aaPredicted RBP16.66■□□□□ 0.26
MKS1-211ENST00000581761 GMCL1Q96IK5 515 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 DNAJC25Q9H1X3 360 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 CBX8Q9HC52 389 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 SYNPO2Q9UMS6 1093 aa16.66■□□□□ 0.26
MKS1-211ENST00000581761 CAVIN2O95810 425 aa16.65■□□□□ 0.26
MKS1-211ENST00000581761 BMP3P12645 472 aa16.65■□□□□ 0.26
MKS1-211ENST00000581761 ZRSR1Q15695 479 aaKnown RBP16.65■□□□□ 0.26
MKS1-211ENST00000581761 QRICH1Q2TAL8 776 aa16.65■□□□□ 0.26
MKS1-211ENST00000581761 JAKMIP3Q5VZ66 844 aa16.65■□□□□ 0.26
MKS1-211ENST00000581761 CNNM3Q8NE01 707 aa16.65■□□□□ 0.26
MKS1-211ENST00000581761 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
MKS1-211ENST00000581761 KIAA1468Q9P260 1216 aa16.65■□□□□ 0.26
MKS1-211ENST00000581761 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
MKS1-211ENST00000581761 PITPNM2Q9BZ72 1349 aa16.65■□□□□ 0.26
MKS1-211ENST00000581761 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 VWA3AA6NCI4 1184 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 PPP1R11O60927 126 aaPredicted RBP16.64■□□□□ 0.25
MKS1-211ENST00000581761 IKQ13123 557 aaPredicted RBP16.64■□□□□ 0.25
MKS1-211ENST00000581761 CDC37Q16543 378 aaPredicted RBP16.64■□□□□ 0.25
MKS1-211ENST00000581761 SYDE2Q5VT97 1194 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 PRAMEF18Q5VWM3 479 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 C11orf57Q6ZUT1 292 aaPredicted RBP16.64■□□□□ 0.25
MKS1-211ENST00000581761 GOPCQ9HD26 462 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 RIC8AQ9NPQ8 531 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 TMEM260Q9NX78 707 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 SERTAD1Q9UHV2 236 aa16.64■□□□□ 0.25
MKS1-211ENST00000581761 ABT1Q9ULW3 272 aaKnown RBP16.64■□□□□ 0.25
MKS1-211ENST00000581761 POLR2AP24928 1970 aaKnown RBP16.64■□□□□ 0.25
MKS1-211ENST00000581761 TMEM232C9JQI7 657 aa16.63■□□□□ 0.25
MKS1-211ENST00000581761 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms