RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 MAP3K21Q5TCX8 1036 aa23.88■■□□□ 1.41
SNX11-209ENST00000581705 CPLX2Q6PUV4 134 aaKnown RBP23.88■■□□□ 1.41
SNX11-209ENST00000581705 TRMT44Q8IYL2 757 aaKnown RBP23.88■■□□□ 1.41
SNX11-209ENST00000581705 DPF3Q92784 378 aa23.88■■□□□ 1.41
SNX11-209ENST00000581705 HTATIP2Q9BUP3 242 aa23.88■■□□□ 1.41
SNX11-209ENST00000581705 HMX1Q9NP08 348 aaPredicted RBP23.88■■□□□ 1.41
SNX11-209ENST00000581705 BTBD7Q9P203 1132 aa23.88■■□□□ 1.41
SNX11-209ENST00000581705 KIF3AQ9Y496 699 aa23.88■■□□□ 1.41
SNX11-209ENST00000581705 GREB1LQ9C091 1923 aaPredicted RBP23.88■■□□□ 1.41
SNX11-209ENST00000581705 METAP2P50579 478 aaKnown RBP eCLIP23.87■■□□□ 1.41
SNX11-209ENST00000581705 ICA1Q05084 483 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 STK3Q13188 491 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 COG2Q14746 738 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 CATIPQ7Z7H3 387 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 ZNF654Q8IZM8 581 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 LPAR1Q92633 364 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 MAP3K14Q99558 947 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 ARHGEF10LQ9HCE6 1279 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 IL17RBQ9NRM6 502 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 FOXD4L1Q9NU39 408 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 TMX2Q9Y320 296 aa23.87■■□□□ 1.41
SNX11-209ENST00000581705 IGKV6D-41A0A0C4DH26 115 aa23.86■■□□□ 1.41
SNX11-209ENST00000581705 CDKL5O76039 1030 aa23.86■■□□□ 1.41
SNX11-209ENST00000581705 HABP4Q5JVS0 413 aaKnown RBP23.86■■□□□ 1.41
SNX11-209ENST00000581705 KIAA1755Q5JYT7 1200 aa23.86■■□□□ 1.41
SNX11-209ENST00000581705 RCSD1Q6JBY9 416 aa23.86■■□□□ 1.41
SNX11-209ENST00000581705 CLEC10AQ8IUN9 316 aa23.86■■□□□ 1.41
SNX11-209ENST00000581705 SMARCC2Q8TAQ2 1214 aa23.86■■□□□ 1.41
SNX11-209ENST00000581705 HOXC10Q9NYD6 342 aa23.86■■□□□ 1.41
SNX11-209ENST00000581705 NAP1L2Q9ULW6 460 aaPredicted RBP23.86■■□□□ 1.41
SNX11-209ENST00000581705 PDCP20941 246 aa23.85■■□□□ 1.41
SNX11-209ENST00000581705 APBA2Q99767 749 aa23.85■■□□□ 1.41
SNX11-209ENST00000581705 TANGO6Q9C0B7 1094 aa23.85■■□□□ 1.41
SNX11-209ENST00000581705 SH2D4AQ9H788 454 aa23.85■■□□□ 1.41
SNX11-209ENST00000581705 SENP2Q9HC62 589 aa23.85■■□□□ 1.41
SNX11-209ENST00000581705 GOLGA8AA7E2F4 631 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 PRKAR2AP13861 404 aaKnown RBP23.84■■□□□ 1.41
SNX11-209ENST00000581705 MAP2K5Q13163 448 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 RGS22Q8NE09 1264 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 VCPKMTQ9H867 229 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 KAT14Q9H8E8 782 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 CPLX1O14810 134 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 CCL14Q16627 93 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 MICU3Q86XE3 530 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 ANKLE1Q8NAG6 615 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 NSUN7Q8NE18 718 aaKnown RBP23.84■■□□□ 1.41
SNX11-209ENST00000581705 KANSL2Q9H9L4 492 aa23.84■■□□□ 1.41
SNX11-209ENST00000581705 RBM28Q9NW13 759 aaKnown RBP23.84■■□□□ 1.41
SNX11-209ENST00000581705 SLC15A5A6NIM6 579 aa23.83■■□□□ 1.4
SNX11-209ENST00000581705 TOP1P11387 765 aaKnown RBP23.83■■□□□ 1.4
SNX11-209ENST00000581705 PTPREP23469 700 aa23.83■■□□□ 1.4
SNX11-209ENST00000581705 GJB2P29033 226 aa23.83■■□□□ 1.4
SNX11-209ENST00000581705 CCT2P78371 535 aaKnown RBP23.83■■□□□ 1.4
SNX11-209ENST00000581705 TROAPQ12815 778 aa23.83■■□□□ 1.4
SNX11-209ENST00000581705 RTN1Q16799 776 aa23.83■■□□□ 1.4
SNX11-209ENST00000581705 PAWRQ96IZ0 340 aaKnown RBP23.83■■□□□ 1.4
SNX11-209ENST00000581705 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.83■■□□□ 1.4
SNX11-209ENST00000581705 MTMR4Q9NYA4 1195 aa23.83■■□□□ 1.4
SNX11-209ENST00000581705 NMT2O60551 498 aa23.82■■□□□ 1.4
SNX11-209ENST00000581705 EEF2P13639 858 aaKnown RBP23.82■■□□□ 1.4
SNX11-209ENST00000581705 CACNB2Q08289 660 aaPredicted RBP23.82■■□□□ 1.4
SNX11-209ENST00000581705 WDR78Q5VTH9 848 aa23.82■■□□□ 1.4
SNX11-209ENST00000581705 SPICE1Q8N0Z3 855 aa23.82■■□□□ 1.4
SNX11-209ENST00000581705 FANCBQ8NB91 859 aa23.82■■□□□ 1.4
SNX11-209ENST00000581705 CEP95Q96GE4 821 aa23.82■■□□□ 1.4
SNX11-209ENST00000581705 SYNPO2Q9UMS6 1093 aa23.82■■□□□ 1.4
SNX11-209ENST00000581705 COLQQ9Y215 455 aaPredicted RBP23.82■■□□□ 1.4
SNX11-209ENST00000581705 RLFQ13129 1914 aa23.82■■□□□ 1.4
SNX11-209ENST00000581705 DSG3P32926 999 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 KIF5BP33176 963 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 GRB14Q14449 540 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 NECAB2Q7Z6G3 386 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 MB21D1Q8N884 522 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 PNMA1Q8ND90 353 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 NCOA5Q9HCD5 579 aaKnown RBP23.81■■□□□ 1.4
SNX11-209ENST00000581705 OGDHLQ9ULD0 1010 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 STX8Q9UNK0 236 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 NR2E3Q9Y5X4 410 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 IVNS1ABPQ9Y6Y0 642 aa23.81■■□□□ 1.4
SNX11-209ENST00000581705 WDR46O15213 610 aaKnown RBP23.8■■□□□ 1.4
SNX11-209ENST00000581705 FLOT1O75955 427 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 CTDNEP1O95476 244 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 TTLL1O95922 423 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 HOXC6P09630 235 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 IFNAR1P17181 557 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 DIS3LQ8TF46 1054 aaKnown RBP23.8■■□□□ 1.4
SNX11-209ENST00000581705 TMEM47Q9BQJ4 181 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 MOV10L1Q9BXT6 1211 aaKnown RBP23.8■■□□□ 1.4
SNX11-209ENST00000581705 SPATC1LQ9H0A9 340 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 FAM217BQ9NTX9 383 aaPredicted RBP23.8■■□□□ 1.4
SNX11-209ENST00000581705 STK36Q9NRP7 1315 aa23.8■■□□□ 1.4
SNX11-209ENST00000581705 PTPDC1A2A3K4 754 aa23.79■■□□□ 1.4
SNX11-209ENST00000581705 MNX1P50219 401 aaPredicted RBP23.79■■□□□ 1.4
SNX11-209ENST00000581705 CTCFLQ8NI51 663 aaPredicted RBP23.79■■□□□ 1.4
SNX11-209ENST00000581705 NYAP2Q9P242 653 aa23.79■■□□□ 1.4
SNX11-209ENST00000581705 A0A0G2JMZ2 1700 aa23.79■■□□□ 1.4
SNX11-209ENST00000581705 GNAQP50148 359 aa23.78■■□□□ 1.4
SNX11-209ENST00000581705 ATP2B2Q01814 1243 aa23.78■■□□□ 1.4
SNX11-209ENST00000581705 NTRK3Q16288 839 aa23.78■■□□□ 1.4
SNX11-209ENST00000581705 FAM184AQ8NB25 1140 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms