RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 USHBP1Q8N6Y0 703 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 MCOLN1Q9GZU1 580 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 CNNM2Q9H8M5 875 aa7.14□□□□□ -1.27
SMCHD1-205ENST00000581383 FAM86C2PA6NEL3 165 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 KRT1P04264 644 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 ACRP10323 421 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 NME1P15531 152 aaKnown RBP7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 GUCY2CP25092 1073 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 ARL4AP40617 200 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 RAB33AQ14088 237 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 NBPF9Q3BBW0 867 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 ZNF385BQ569K4 471 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 NBPF12Q5TAG4 269 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 CDCP2Q5VXM1 449 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 OLFML2BQ68BL8 750 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 SLC9A7Q96T83 725 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 DSCC1Q9BVC3 393 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 CDADC1Q9BWV3 514 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 SGPP1Q9BX95 441 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 HDAC8Q9BY41 377 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 ZSWIM4Q9H7M6 989 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 ST7Q9NRC1 585 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 ACTR10Q9NZ32 417 aa7.13□□□□□ -1.27
SMCHD1-205ENST00000581383 A0A1W2PQH9 124 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 U2SURPO15042 1029 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 PEX10O60683 326 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 PRAMEF1O95521 474 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 CASP7P55210 303 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 RTP1P59025 263 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 SRSF3P84103 164 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 ZYXQ15942 572 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 NBPF6Q5VWK0 638 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 LARP1BQ659C4 914 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 INTS3Q68E01 1043 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 LILRA6Q6PI73 481 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 C1QL4Q86Z23 238 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 MAP6Q96JE9 813 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 NBPF4Q96M43 638 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 ZNF552Q9H707 407 aaPredicted RBP7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 CHST7Q9NS84 486 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 PCDHB12Q9Y5F1 795 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 TAF6LQ9Y6J9 622 aa7.12□□□□□ -1.27
SMCHD1-205ENST00000581383 TEX51A0A1B0GUA7 166 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 ENDOUP21128 410 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 CCNFP41002 786 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 KIR2DL1P43626 348 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 KIR2DL2P43627 348 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 SNW1Q13573 536 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 BMS1Q14692 1282 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 UNC5AQ6ZN44 842 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 TAB3Q8N5C8 712 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 CELF2-AS1Q8N7Q2 184 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 NAT16Q8N8M0 369 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 C19orf47Q8N9M1 422 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 MICAL1Q8TDZ2 1067 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 LINC01599Q8WXQ3 324 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 PRDM14Q9GZV8 571 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 OSBPL2Q9H1P3 480 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 ZCCHC4Q9H5U6 513 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 SHROOM4Q9ULL8 1493 aa7.11□□□□□ -1.27
SMCHD1-205ENST00000581383 CCDC85CA6NKD9 419 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 TNFRSF10CO14798 259 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 SIGLEC6O43699 453 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 INHBBP09529 407 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 BMP7P18075 431 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 TCERG1LQ5VWI1 586 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 CWF19L1Q69YN2 538 aaKnown RBP7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 CILP2Q8IUL8 1156 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 LINC00116Q8NCU8 138 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 VWCEQ96DN2 955 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 SP110Q9HB58 689 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 GFOD1Q9NXC2 390 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 EBF1Q9UH73 591 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 KCTD3Q9Y597 815 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 IRAK3Q9Y616 596 aa7.1□□□□□ -1.27
SMCHD1-205ENST00000581383 NCANO14594 1321 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 LTBP3Q9NS15 1303 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 MYOCOSA0A1B0GUC4 107 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 A0A1W2PQJ5 194 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 NRDCO43847 1150 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 SDHBP21912 280 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 SERINC3Q13530 473 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 FXNQ16595 210 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 GALNT18Q6P9A2 607 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 CCDC144CPQ8IYA2 1237 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 DHRS1Q96LJ7 313 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 PIF1Q9H611 641 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 SIRPGQ9P1W8 387 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 PCDHB10Q9UN67 800 aa7.09□□□□□ -1.27
SMCHD1-205ENST00000581383 WTIPA6NIX2 430 aaPredicted RBP7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 PRRG2O14669 202 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 DDAH1O94760 285 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 MPOP05164 745 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 CTSWP56202 376 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 NOL9Q5SY16 702 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 ZPBP2Q6X784 338 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 NLRX1Q86UT6 975 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 AMIGO3Q86WK7 504 aa7.08□□□□□ -1.28
SMCHD1-205ENST00000581383 TMEM151BQ8IW70 566 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms