RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 CTCFP49711 727 aaPredicted RBP17.55■□□□□ 0.4
MKS1-210ENST00000581180 CAP1Q01518 475 aa17.55■□□□□ 0.4
MKS1-210ENST00000581180 ME3Q16798 604 aa17.55■□□□□ 0.4
MKS1-210ENST00000581180 CMTR1Q8N1G2 835 aaKnown RBP17.55■□□□□ 0.4
MKS1-210ENST00000581180 ZNF296Q8WUU4 475 aaPredicted RBP17.55■□□□□ 0.4
MKS1-210ENST00000581180 MOV10L1Q9BXT6 1211 aaKnown RBP17.55■□□□□ 0.4
MKS1-210ENST00000581180 RAVER2Q9HCJ3 691 aaKnown RBP17.55■□□□□ 0.4
MKS1-210ENST00000581180 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
MKS1-210ENST00000581180 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 CCDC196A0A1B0GTZ2 297 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 FKTNO75072 461 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
MKS1-210ENST00000581180 CTGFP29279 349 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 STAT3P40763 770 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 CCT2P78371 535 aaKnown RBP17.54■□□□□ 0.4
MKS1-210ENST00000581180 LACTBP83111 547 aaPredicted RBP17.54■□□□□ 0.4
MKS1-210ENST00000581180 NTRK3Q16288 839 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 CDC37Q16543 378 aaPredicted RBP17.54■□□□□ 0.4
MKS1-210ENST00000581180 NOL8Q76FK4 1167 aaKnown RBP17.54■□□□□ 0.4
MKS1-210ENST00000581180 RIOX2Q8IUF8 465 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 CPXCR1Q8N123 301 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 TEX13BQ9BXU2 312 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 PORCNQ9H237 461 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 NCOA5Q9HCD5 579 aaKnown RBP17.54■□□□□ 0.4
MKS1-210ENST00000581180 LIMCH1Q9UPQ0 1083 aa17.54■□□□□ 0.4
MKS1-210ENST00000581180 ST18O60284 1047 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 ICAM1P05362 532 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 CCNA1P78396 465 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 SCRN1Q12765 414 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 STK3Q13188 491 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 PLS1Q14651 629 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 QRICH1Q2TAL8 776 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 CCDC174Q6PII3 467 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 SHCBP1Q8NEM2 672 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 AGBL1Q96MI9 1066 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 PIGSQ96S52 555 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 EFCC1Q9HA90 598 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 RIPK3Q9Y572 518 aa17.53■□□□□ 0.4
MKS1-210ENST00000581180 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
MKS1-210ENST00000581180 PLXNA1Q9UIW2 1896 aa17.52■□□□□ 0.4
MKS1-210ENST00000581180 ZBTB5O15062 677 aa17.52■□□□□ 0.4
MKS1-210ENST00000581180 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
MKS1-210ENST00000581180 SLC25A27O95847 323 aa17.52■□□□□ 0.4
MKS1-210ENST00000581180 LBX1P52954 281 aa17.52■□□□□ 0.4
MKS1-210ENST00000581180 ST3GAL1Q11201 340 aa17.52■□□□□ 0.4
MKS1-210ENST00000581180 SNRNP48Q6IEG0 339 aaKnown RBP17.52■□□□□ 0.4
MKS1-210ENST00000581180 CD99L2Q8TCZ2 262 aa17.52■□□□□ 0.4
MKS1-210ENST00000581180 ARHGAP39Q9C0H5 1083 aa17.52■□□□□ 0.4
MKS1-210ENST00000581180 SLKQ9H2G2 1235 aaPredicted RBP17.52■□□□□ 0.4
MKS1-210ENST00000581180 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.4
MKS1-210ENST00000581180 LCTP09848 1927 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 PPP1R11O60927 126 aaPredicted RBP17.51■□□□□ 0.39
MKS1-210ENST00000581180 IFNAR1P17181 557 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 TAL1P17542 331 aaPredicted RBP17.51■□□□□ 0.39
MKS1-210ENST00000581180 ERCC3P19447 782 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 COPB2P35606 906 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 CCDC82Q8N4S0 544 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 GTF3C6Q969F1 213 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 ERO1AQ96HE7 468 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 ZSCAN31Q96LW9 406 aaPredicted RBP17.51■□□□□ 0.39
MKS1-210ENST00000581180 PNMA2Q9UL42 364 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 CCPG1Q9ULG6 757 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
MKS1-210ENST00000581180 PNMA6FA0A0J9YX94 578 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 MAPK4P31152 587 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 PSMC4P43686 418 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 TKFCQ3LXA3 575 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
MKS1-210ENST00000581180 HOMER1Q86YM7 354 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 NECAB1Q8N987 351 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 RRP36Q96EU6 259 aaKnown RBP17.5■□□□□ 0.39
MKS1-210ENST00000581180 TRIM47Q96LD4 638 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 MROH8Q9H579 483 aa17.5■□□□□ 0.39
MKS1-210ENST00000581180 CTDNEP1O95476 244 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 MCM2P49736 904 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 FCGRTP55899 365 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 KIF22Q14807 665 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 GPR142Q7Z601 462 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 NCAPG2Q86XI2 1143 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 FBXO11Q86XK2 927 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 CHST13Q8NET6 341 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 PIBF1Q8WXW3 757 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 AMNQ9BXJ7 453 aa17.49■□□□□ 0.39
MKS1-210ENST00000581180 SH2B1Q9NRF2 756 aaPredicted RBP17.49■□□□□ 0.39
MKS1-210ENST00000581180 hCG_1642624A0A1W2PR95 340 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 PRPF3O43395 683 aaKnown RBP17.48■□□□□ 0.39
MKS1-210ENST00000581180 ECM2O94769 699 aaPredicted RBP17.48■□□□□ 0.39
MKS1-210ENST00000581180 ALAS1P13196 640 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 PLEKHH3Q7Z736 793 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 CLEC4DQ8WXI8 215 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 PHKBQ93100 1093 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 TRERF1Q96PN7 1200 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
MKS1-210ENST00000581180 RNF146Q9NTX7 359 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 V9GY48 417 aaPredicted RBP17.48■□□□□ 0.39
MKS1-210ENST00000581180 MCM3APO60318 1980 aa17.48■□□□□ 0.39
MKS1-210ENST00000581180 ABCB11O95342 1321 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 TNPO2O14787 897 aaKnown RBP17.47■□□□□ 0.39
MKS1-210ENST00000581180 CPLX1O14810 134 aa17.47■□□□□ 0.39
MKS1-210ENST00000581180 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms