RNA–Protein interactions for RNA: ENST00000580972.1

RNU4ATAC-201, Transcript of RNA, U4atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU4ATAC, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC-201ENST00000580972 TBC1D5Q92609 795 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ATG4CQ96DT6 458 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 OTUD5Q96G74 571 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 AGBL1Q96MI9 1066 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 WDR18Q9BV38 432 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TANGO6Q9C0B7 1094 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SH3GLB2Q9NR46 395 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CCDC88AQ3V6T2 1871 aa7.06□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZNF536O15090 1300 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CDK5RAP2Q96SN8 1893 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 A0A087WWV3 80 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 IQCA1LA6NCM1 817 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SPTLC2O15270 562 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 XBP1P17861 261 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SMARCA1P28370 1054 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 HOXA13P31271 388 aaPredicted RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 MCM7P33993 719 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ME1P48163 572 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 STAT2P52630 851 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 BACE1P56817 501 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 UBE2HP62256 183 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SLC39A14Q15043 492 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 IL17AQ16552 155 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TTC38Q5R3I4 469 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 USP49Q70CQ1 688 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GAS2L3Q86XJ1 694 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 FBXO11Q86XK2 927 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CCAR1Q8IX12 1150 aaKnown RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 FSIP1Q8NA03 581 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CCDC148Q8NFR7 591 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 BICD2Q8TD16 824 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZC3H15Q8WU90 426 aaKnown RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GJA10Q969M2 543 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 HOOK2Q96ED9 719 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZFP91Q96JP5 570 aaPredicted RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SLF1Q9BQI6 1058 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SCAND2PQ9GZW5 306 aaPredicted RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZMYND12Q9H0C1 365 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TMEM60Q9H2L4 133 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 RANBP17Q9H2T7 1088 aaKnown RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SH2D4AQ9H788 454 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 RAVER2Q9HCJ3 691 aaKnown RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 POLR3EQ9NVU0 708 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 FBXO2Q9UK22 296 aaPredicted RBP7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 AFG3L2Q9Y4W6 797 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PCDHA1Q9Y5I3 950 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SRCAPQ6ZRS2 3230 aa7.05□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ELP1O95163 1332 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GREB1LQ9C091 1923 aaPredicted RBP7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CCDC194A0A1B0GVG4 234 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 A0A1B0GVL5 298 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ESYT2A0FGR8 921 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 NFIBO00712 420 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 IRF6O14896 467 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 WDR46O15213 610 aaKnown RBP7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 NR1I2O75469 434 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 FLOT1O75955 427 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TDP2O95551 362 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 YEATS4O95619 227 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PDIA4P13667 645 aaKnown RBP7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CALML3P27482 149 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 IREB2P48200 963 aaKnown RBP7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 UBXN2AP68543 259 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ZSCAN23Q3MJ62 389 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SHC4Q6S5L8 630 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 GADL1Q6ZQY3 521 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 LDHDQ86WU2 507 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CPXCR1Q8N123 301 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 C4orf32Q8N8J7 132 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 RGS22Q8NE09 1264 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 TBCKQ8TEA7 893 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 ERCC4Q92889 916 aaPredicted RBP7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PURBQ96QR8 312 aaKnown RBP7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 R3HDMLQ9H3Y0 253 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 C6orf50Q9HD87 102 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 RIC8AQ9NPQ8 531 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 HOMER2Q9NSB8 354 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 DACT1Q9NYF0 836 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 FEM1BQ9UK73 627 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CFAP45Q9UL16 551 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PPP1R9AQ9ULJ8 1098 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SYNPO2Q9UMS6 1093 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CSADQ9Y600 493 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 FOCADQ5VW36 1801 aa7.04□□□□□ -1.28
RNU4ATAC-201ENST00000580972 A0A087X0B3 334 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SYCE3A1L190 88 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SPDYE5A6NIY4 337 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PP2D1A8MPX8 630 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 MEIS2O14770 477 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 SLC37A4O43826 429 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 PPP1R12BO60237 982 aaPredicted RBP7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CELF2O95319 508 aaKnown RBP7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CLK2P49760 499 aaKnown RBP7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 NDUFA8P51970 172 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 MOGSQ13724 837 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 NONOQ15233 471 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 CAMK4Q16566 473 aa7.03□□□□□ -1.28
RNU4ATAC-201ENST00000580972 LETM2Q2VYF4 491 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms