RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 KDM4AO75164 1064 aa23.63■■□□□ 1.37
SMG8-204ENST00000580498 AKR1A1P14550 325 aa23.63■■□□□ 1.37
SMG8-204ENST00000580498 GPATCH4Q5T3I0 446 aaKnown RBP23.63■■□□□ 1.37
SMG8-204ENST00000580498 SYDE2Q5VT97 1194 aa23.63■■□□□ 1.37
SMG8-204ENST00000580498 TRERF1Q96PN7 1200 aa23.63■■□□□ 1.37
SMG8-204ENST00000580498 U3KPZ7 1027 aaPredicted RBP23.63■■□□□ 1.37
SMG8-204ENST00000580498 POTEB2H3BUK9 544 aa23.62■■□□□ 1.37
SMG8-204ENST00000580498 IGHA2P01877 340 aa23.62■■□□□ 1.37
SMG8-204ENST00000580498 HABP4Q5JVS0 413 aaKnown RBP23.62■■□□□ 1.37
SMG8-204ENST00000580498 KIAA1211Q6ZU35 1233 aa23.62■■□□□ 1.37
SMG8-204ENST00000580498 RNF180Q86T96 592 aa23.62■■□□□ 1.37
SMG8-204ENST00000580498 TRPV1Q8NER1 839 aa23.62■■□□□ 1.37
SMG8-204ENST00000580498 SENP6Q9GZR1 1112 aaPredicted RBP23.62■■□□□ 1.37
SMG8-204ENST00000580498 GPCPD1Q9NPB8 672 aa23.62■■□□□ 1.37
SMG8-204ENST00000580498 TACC3Q9Y6A5 838 aa23.62■■□□□ 1.37
SMG8-204ENST00000580498 B4E1Z4 1266 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 ICAM1P05362 532 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 PDHBP11177 359 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 PRAMEF19Q5SWL8 479 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 BTNL9Q6UXG8 535 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 CHRDL2Q6WN34 429 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 CENPQQ7L2Z9 268 aaPredicted RBP23.61■■□□□ 1.37
SMG8-204ENST00000580498 ZSCAN10Q96SZ4 725 aaPredicted RBP23.61■■□□□ 1.37
SMG8-204ENST00000580498 XPNPEP3Q9NQH7 507 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 ZHX1Q9UKY1 873 aaPredicted RBP23.61■■□□□ 1.37
SMG8-204ENST00000580498 FAM184BQ9ULE4 1060 aa23.61■■□□□ 1.37
SMG8-204ENST00000580498 FRMPD2Q68DX3 1309 aaPredicted RBP23.6■■□□□ 1.37
SMG8-204ENST00000580498 CEP290O15078 2479 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 DNAJC25-GNG10A0A024R161 153 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 COL6A1P12109 1028 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 CHMLP26374 656 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 MNX1P50219 401 aaPredicted RBP23.6■■□□□ 1.37
SMG8-204ENST00000580498 MAMDC4Q6UXC1 1216 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 AGBL1Q96MI9 1066 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 ZKSCAN3Q9BRR0 538 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 ABHD16BQ9H3Z7 469 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 SPC25Q9HBM1 224 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 PRKAG2Q9UGJ0 569 aa23.6■■□□□ 1.37
SMG8-204ENST00000580498 COLQQ9Y215 455 aaPredicted RBP23.6■■□□□ 1.37
SMG8-204ENST00000580498 ERICH2A1L162 156 aa23.59■■□□□ 1.37
SMG8-204ENST00000580498 ASB14A6NK59 587 aa23.59■■□□□ 1.37
SMG8-204ENST00000580498 ZNF543Q08ER8 600 aa23.59■■□□□ 1.37
SMG8-204ENST00000580498 ANO1Q5XXA6 986 aa23.59■■□□□ 1.37
SMG8-204ENST00000580498 RALYLQ86SE5 291 aaKnown RBP23.59■■□□□ 1.37
SMG8-204ENST00000580498 PNMA1Q8ND90 353 aa23.59■■□□□ 1.37
SMG8-204ENST00000580498 MPHOSPH6Q99547 160 aaKnown RBP23.59■■□□□ 1.37
SMG8-204ENST00000580498 RANBP17Q9H2T7 1088 aaKnown RBP23.59■■□□□ 1.37
SMG8-204ENST00000580498 SLC16A2P36021 539 aa23.58■■□□□ 1.37
SMG8-204ENST00000580498 SART3Q15020 963 aaKnown RBP23.58■■□□□ 1.37
SMG8-204ENST00000580498 GJC2Q5T442 439 aaPredicted RBP23.58■■□□□ 1.37
SMG8-204ENST00000580498 ZNF536O15090 1300 aa23.58■■□□□ 1.36
SMG8-204ENST00000580498 ASPRV1Q53RT3 343 aa23.57■■□□□ 1.36
SMG8-204ENST00000580498 IFIT1BQ5T764 474 aaKnown RBP23.57■■□□□ 1.36
SMG8-204ENST00000580498 NSMFQ6X4W1 530 aa23.57■■□□□ 1.36
SMG8-204ENST00000580498 A1CFQ9NQ94 594 aaKnown RBP23.57■■□□□ 1.36
SMG8-204ENST00000580498 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.57■■□□□ 1.36
SMG8-204ENST00000580498 ADD3Q9UEY8 706 aaKnown RBP23.57■■□□□ 1.36
SMG8-204ENST00000580498 TNKSO95271 1327 aa23.57■■□□□ 1.36
SMG8-204ENST00000580498 ACVR2BQ13705 512 aa23.56■■□□□ 1.36
SMG8-204ENST00000580498 TTBK2Q6IQ55 1244 aa23.56■■□□□ 1.36
SMG8-204ENST00000580498 CASC1Q6TDU7 716 aa23.56■■□□□ 1.36
SMG8-204ENST00000580498 ARMCX2Q7L311 632 aa23.56■■□□□ 1.36
SMG8-204ENST00000580498 ZSWIM5Q9P217 1185 aa23.56■■□□□ 1.36
SMG8-204ENST00000580498 B4DLN1 442 aa23.55■■□□□ 1.36
SMG8-204ENST00000580498 DHX16O60231 1041 aaKnown RBP23.55■■□□□ 1.36
SMG8-204ENST00000580498 PARP1P09874 1014 aaKnown RBP23.55■■□□□ 1.36
SMG8-204ENST00000580498 ZNF865P0CJ78 1059 aaPredicted RBP23.55■■□□□ 1.36
SMG8-204ENST00000580498 SNHG28P0DPA3 235 aa23.55■■□□□ 1.36
SMG8-204ENST00000580498 MRPL12P52815 198 aaKnown RBP23.55■■□□□ 1.36
SMG8-204ENST00000580498 SNAP25P60880 206 aa23.55■■□□□ 1.36
SMG8-204ENST00000580498 LRRC41Q15345 812 aa23.55■■□□□ 1.36
SMG8-204ENST00000580498 ANKS1AQ92625 1134 aa23.55■■□□□ 1.36
SMG8-204ENST00000580498 ZMYND8Q9ULU4 1186 aaPredicted RBP23.55■■□□□ 1.36
SMG8-204ENST00000580498 ALPK3Q96L96 1907 aa23.55■■□□□ 1.36
SMG8-204ENST00000580498 A0A1W2PPC1 479 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 SGSM2O43147 1006 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 SLC34A2O95436 690 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 ATN1P54259 1190 aaPredicted RBP23.54■■□□□ 1.36
SMG8-204ENST00000580498 RASGRP2Q7LDG7 609 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 FAM133AQ8N9E0 248 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 NCOA7Q8NI08 942 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 WDR19Q8NEZ3 1342 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 SMCHD1A6NHR9 2005 aa23.54■■□□□ 1.36
SMG8-204ENST00000580498 PTPDC1A2A3K4 754 aa23.53■■□□□ 1.36
SMG8-204ENST00000580498 DUSP11O75319 330 aaKnown RBP23.53■■□□□ 1.36
SMG8-204ENST00000580498 SNAI1O95863 264 aaPredicted RBP23.53■■□□□ 1.36
SMG8-204ENST00000580498 NEFLP07196 543 aa23.53■■□□□ 1.36
SMG8-204ENST00000580498 LRRC26Q2I0M4 334 aa23.53■■□□□ 1.36
SMG8-204ENST00000580498 NOL8Q76FK4 1167 aaKnown RBP23.53■■□□□ 1.36
SMG8-204ENST00000580498 CCDC144CPQ8IYA2 1237 aa23.53■■□□□ 1.36
SMG8-204ENST00000580498 ENAHQ8N8S7 591 aaPredicted RBP23.53■■□□□ 1.36
SMG8-204ENST00000580498 LBHD1Q9BQE6 289 aaPredicted RBP23.53■■□□□ 1.36
SMG8-204ENST00000580498 CYP39A1Q9NYL5 469 aa23.53■■□□□ 1.36
SMG8-204ENST00000580498 LOC102724159A0A0B4J2E5 919 aa23.52■■□□□ 1.36
SMG8-204ENST00000580498 TAL1P17542 331 aaPredicted RBP23.52■■□□□ 1.36
SMG8-204ENST00000580498 PWP2Q15269 919 aaKnown RBP23.52■■□□□ 1.36
SMG8-204ENST00000580498 PCSK9Q8NBP7 692 aaKnown RBP23.52■■□□□ 1.36
SMG8-204ENST00000580498 NUP133Q8WUM0 1156 aa23.52■■□□□ 1.36
SMG8-204ENST00000580498 TSEN34Q9BSV6 310 aaKnown RBP23.52■■□□□ 1.36
SMG8-204ENST00000580498 PGK1P00558 417 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms